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  5. AT3G12530

AT3G12530


Description : PSF2


Gene families : OG_01_0005929 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G12530
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Cre01.g029100 No alias Cell cycle.interphase.DNA replication.initiation.GINS... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g18580.1 No alias component PSF2 of GINS DNA replication fork maintenance complex 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_19790V3.1 No alias PSF2 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000719 photoreactive repair IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0000798 nuclear cohesin complex IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003913 DNA photolyase activity IEP HCCA
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005880 nuclear microtubule IEP HCCA
CC GO:0005887 integral component of plasma membrane IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006290 pyrimidine dimer repair IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007130 synaptonemal complex assembly IEP HCCA
BP GO:0007349 cellularization IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
CC GO:0008278 cohesin complex IEP HCCA
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP HCCA
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0009650 UV protection IEP HCCA
CC GO:0009898 cytoplasmic side of plasma membrane IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
BP GO:0010342 endosperm cellularization IEP HCCA
BP GO:0010466 negative regulation of peptidase activity IEP HCCA
BP GO:0010951 negative regulation of endopeptidase activity IEP HCCA
MF GO:0015204 urea transmembrane transporter activity IEP HCCA
BP GO:0015840 urea transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016572 histone phosphorylation IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018105 peptidyl-serine phosphorylation IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018209 peptidyl-serine modification IEP HCCA
BP GO:0019755 one-carbon compound transport IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0030162 regulation of proteolysis IEP HCCA
BP GO:0032269 negative regulation of cellular protein metabolic process IEP HCCA
MF GO:0032442 phenylcoumaran benzylic ether reductase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035173 histone kinase activity IEP HCCA
MF GO:0035174 histone serine kinase activity IEP HCCA
MF GO:0035175 histone kinase activity (H3-S10 specific) IEP HCCA
BP GO:0035404 histone-serine phosphorylation IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043987 histone H3-S10 phosphorylation IEP HCCA
BP GO:0043988 histone H3-S28 phosphorylation IEP HCCA
MF GO:0044022 histone kinase activity (H3-S28 specific) IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0045861 negative regulation of proteolysis IEP HCCA
BP GO:0048235 pollen sperm cell differentiation IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
CC GO:0048555 generative cell nucleus IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
BP GO:0052547 regulation of peptidase activity IEP HCCA
BP GO:0052548 regulation of endopeptidase activity IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0070193 synaptonemal complex organization IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0080159 zygote elongation IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
CC GO:0098552 side of membrane IEP HCCA
CC GO:0098562 cytoplasmic side of membrane IEP HCCA
MF GO:0098599 palmitoyl hydrolase activity IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR021151 GINS_A 54 161
PLAZA 3.0 Dicots AT3G12530