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  5. AT3G13445

AT3G13445


Description : TATA binding protein 1


Gene families : OG_01_0003272 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G13445
Cluster HCCA: Cluster_203


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000418 RNA polymerase IV complex IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003691 double-stranded telomeric DNA binding IEP HCCA
MF GO:0004364 glutathione transferase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005665 RNA polymerase II, core complex IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006352 DNA-templated transcription, initiation IEP HCCA
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0031371 ubiquitin conjugating enzyme complex IEP HCCA
CC GO:0031372 UBC13-MMS2 complex IEP HCCA
CC GO:0031965 nuclear membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035064 methylated histone binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140030 modification-dependent protein binding IEP HCCA
MF GO:0140034 methylation-dependent protein binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000814 TBP 112 195
IPR000814 TBP 24 103
PLAZA 3.0 Dicots AT3G13445