AT3G14180

Description : sequence-specific DNA binding transcription factors

Gene families : OG_01_0000699 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G14180
Cluster	HCCA: Cluster_76

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT3G54390	No alias	sequence-specific DNA binding transcription factors	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_21750V3.1	No alias	aspartate/glutamate/uridylate kinase family protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	RCA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010431	seed maturation	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	RCA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0045893	positive regulation of transcription, DNA-templated	RCA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000268	peroxisome targeting sequence binding	IEP	HCCA
MF	GO:0000287	magnesium ion binding	IEP	HCCA
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	IEP	HCCA
CC	GO:0000418	RNA polymerase IV complex	IEP	HCCA
CC	GO:0000419	RNA polymerase V complex	IEP	HCCA
CC	GO:0000932	P-body	IEP	HCCA
MF	GO:0000976	transcription cis-regulatory region binding	IEP	HCCA
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	IEP	HCCA
MF	GO:0001067	transcription regulatory region nucleic acid binding	IEP	HCCA
BP	GO:0001709	cell fate determination	IEP	HCCA
MF	GO:0003997	acyl-CoA oxidase activity	IEP	HCCA
MF	GO:0004017	adenylate kinase activity	IEP	HCCA
MF	GO:0004551	nucleotide diphosphatase activity	IEP	HCCA
MF	GO:0004605	phosphatidate cytidylyltransferase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005048	signal sequence binding	IEP	HCCA
MF	GO:0005053	peroxisome matrix targeting signal-2 binding	IEP	HCCA
MF	GO:0005539	glycosaminoglycan binding	IEP	HCCA
CC	GO:0005665	RNA polymerase II, core complex	IEP	HCCA
CC	GO:0005681	spliceosomal complex	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
BP	GO:0006351	transcription, DNA-templated	IEP	HCCA
BP	GO:0006366	transcription by RNA polymerase II	IEP	HCCA
BP	GO:0006513	protein monoubiquitination	IEP	HCCA
BP	GO:0006625	protein targeting to peroxisome	IEP	HCCA
BP	GO:0006635	fatty acid beta-oxidation	IEP	HCCA
BP	GO:0006839	mitochondrial transport	IEP	HCCA
BP	GO:0006855	xenobiotic transmembrane transport	IEP	HCCA
BP	GO:0007031	peroxisome organization	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0008327	methyl-CpG binding	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0009062	fatty acid catabolic process	IEP	HCCA
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	HCCA
BP	GO:0010262	somatic embryogenesis	IEP	HCCA
CC	GO:0010369	chromocenter	IEP	HCCA
BP	GO:0015919	peroxisomal membrane transport	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
BP	GO:0016558	protein import into peroxisome matrix	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016819	hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides	IEP	HCCA
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	HCCA
BP	GO:0017038	protein import	IEP	HCCA
MF	GO:0017151	DEAD/H-box RNA helicase binding	IEP	HCCA
BP	GO:0019395	fatty acid oxidation	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0030145	manganese ion binding	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
BP	GO:0031087	deadenylation-independent decapping of nuclear-transcribed mRNA	IEP	HCCA
BP	GO:0031099	regeneration	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0034440	lipid oxidation	IEP	HCCA
MF	GO:0035064	methylated histone binding	IEP	HCCA
CC	GO:0035770	ribonucleoprotein granule	IEP	HCCA
CC	GO:0036464	cytoplasmic ribonucleoprotein granule	IEP	HCCA
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0042834	peptidoglycan binding	IEP	HCCA
BP	GO:0042908	xenobiotic transport	IEP	HCCA
MF	GO:0043530	adenosine 5'-monophosphoramidase activity	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0043574	peroxisomal transport	IEP	HCCA
BP	GO:0044242	cellular lipid catabolic process	IEP	HCCA
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0047627	adenylylsulfatase activity	IEP	HCCA
MF	GO:0047710	bis(5'-adenosyl)-triphosphatase activity	IEP	HCCA
BP	GO:0048598	embryonic morphogenesis	IEP	HCCA
MF	GO:0050072	m7G(5')pppN diphosphatase activity	IEP	HCCA
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0065002	intracellular protein transmembrane transport	IEP	HCCA
MF	GO:0070567	cytidylyltransferase activity	IEP	HCCA
BP	GO:0071806	protein transmembrane transport	IEP	HCCA
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	HCCA
BP	GO:0072662	protein localization to peroxisome	IEP	HCCA
BP	GO:0072663	establishment of protein localization to peroxisome	IEP	HCCA
MF	GO:0080025	phosphatidylinositol-3,5-bisphosphate binding	IEP	HCCA
BP	GO:0080186	developmental vegetative growth	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
BP	GO:0110154	RNA decapping	IEP	HCCA
BP	GO:0110156	methylguanosine-cap decapping	IEP	HCCA
MF	GO:0140030	modification-dependent protein binding	IEP	HCCA
MF	GO:0140034	methylation-dependent protein binding	IEP	HCCA
BP	GO:1900055	regulation of leaf senescence	IEP	HCCA
BP	GO:1900056	negative regulation of leaf senescence	IEP	HCCA
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	HCCA
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	HCCA

No InterPro domains available for this sequence

External Links

PLAZA 3.0 Dicots	AT3G14180

AT3G14180

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation