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  5. AT3G15930

AT3G15930


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0017158 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G15930
Cluster HCCA: Cluster_232


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0006264 mitochondrial DNA replication IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008285 negative regulation of cell population proliferation IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0010101 post-embryonic root morphogenesis IEP HCCA
BP GO:0010102 lateral root morphogenesis IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
BP GO:0031590 wybutosine metabolic process IEP HCCA
BP GO:0031591 wybutosine biosynthetic process IEP HCCA
BP GO:0033258 plastid DNA metabolic process IEP HCCA
BP GO:0033259 plastid DNA replication IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 433 479
IPR002885 Pentatricopeptide_repeat 332 379
IPR002885 Pentatricopeptide_repeat 200 247
IPR002885 Pentatricopeptide_repeat 97 144
IPR002885 Pentatricopeptide_repeat 501 532
IPR002885 Pentatricopeptide_repeat 275 301
IPR002885 Pentatricopeptide_repeat 303 329
IPR002885 Pentatricopeptide_repeat 407 432
PLAZA 3.0 Dicots AT3G15930