AT3G16440

Description : myrosinase-binding protein-like protein-300B

Gene families : OG_01_0000127 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G16440
Cluster	HCCA: Cluster_225

Target	Alias	Description	ECC score	Gene Family Method
AT1G33790	No alias	jacalin lectin family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G52030	No alias	myrosinase-binding protein 2	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G52040	No alias	myrosinase-binding protein 1	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G52110	No alias	Mannose-binding lectin superfamily protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G52120	No alias	Mannose-binding lectin superfamily protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G52130	No alias	Mannose-binding lectin superfamily protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G60095	No alias	Mannose-binding lectin superfamily protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G60110	No alias	Mannose-binding lectin superfamily protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G61230	No alias	Mannose-binding lectin superfamily protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G39330	No alias	jacalin-related lectin 23	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G16420	No alias	PYK10-binding protein 1	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G16430	No alias	jacalin-related lectin 31	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G16450	No alias	Mannose-binding lectin superfamily protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G28520	No alias	Mannose-binding lectin superfamily protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38540	No alias	Mannose-binding lectin superfamily protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38550	No alias	Mannose-binding lectin superfamily protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	RCA	Interproscan
BP	GO:0003006	developmental process involved in reproduction	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IMP	Interproscan
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000217	DNA secondary structure binding	IEP	HCCA
CC	GO:0000323	lytic vacuole	IEP	HCCA
MF	GO:0003680	minor groove of adenine-thymine-rich DNA binding	IEP	HCCA
MF	GO:0003838	sterol 24-C-methyltransferase activity	IEP	HCCA
MF	GO:0004311	farnesyltranstransferase activity	IEP	HCCA
MF	GO:0004365	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	IEP	HCCA
MF	GO:0004372	glycine hydroxymethyltransferase activity	IEP	HCCA
MF	GO:0004536	deoxyribonuclease activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004568	chitinase activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0004655	porphobilinogen synthase activity	IEP	HCCA
MF	GO:0004659	prenyltransferase activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005740	mitochondrial envelope	IEP	HCCA
BP	GO:0006563	L-serine metabolic process	IEP	HCCA
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
BP	GO:0006749	glutathione metabolic process	IEP	HCCA
MF	GO:0008169	C-methyltransferase activity	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
MF	GO:0008417	fucosyltransferase activity	IEP	HCCA
MF	GO:0008422	beta-glucosidase activity	IEP	HCCA
MF	GO:0008886	glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	IEP	HCCA
BP	GO:0009647	skotomorphogenesis	IEP	HCCA
MF	GO:0009672	auxin:proton symporter activity	IEP	HCCA
BP	GO:0009743	response to carbohydrate	IEP	HCCA
BP	GO:0009744	response to sucrose	IEP	HCCA
BP	GO:0009746	response to hexose	IEP	HCCA
BP	GO:0009749	response to glucose	IEP	HCCA
BP	GO:0009832	plant-type cell wall biogenesis	IEP	HCCA
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEP	HCCA
CC	GO:0009925	basal plasma membrane	IEP	HCCA
BP	GO:0009958	positive gravitropism	IEP	HCCA
MF	GO:0010329	auxin efflux transmembrane transporter activity	IEP	HCCA
BP	GO:0010453	regulation of cell fate commitment	IEP	HCCA
BP	GO:0010455	positive regulation of cell fate commitment	IEP	HCCA
BP	GO:0010628	positive regulation of gene expression	IEP	HCCA
MF	GO:0015926	glucosidase activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	HCCA
MF	GO:0016759	cellulose synthase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0019137	thioglucosidase activity	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0034284	response to monosaccharide	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
MF	GO:0043891	glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0045165	cell fate commitment	IEP	HCCA
MF	GO:0045547	dehydrodolichyl diphosphate synthase activity	IEP	HCCA
BP	GO:0045597	positive regulation of cell differentiation	IEP	HCCA
BP	GO:0046685	response to arsenic-containing substance	IEP	HCCA
BP	GO:0048766	root hair initiation	IEP	HCCA
BP	GO:0048829	root cap development	IEP	HCCA
BP	GO:0051775	response to redox state	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
CC	GO:0071944	cell periphery	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001229	Jacalin-like_lectin_dom	165	296
IPR001229	Jacalin-like_lectin_dom	13	145

External Links

PLAZA 3.0 Dicots	AT3G16440

AT3G16440

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation