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  5. AT3G16960

AT3G16960


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: Plant self-incompatibility protein S1 family (TAIR:AT3G16970.1); Has 22 Blast hits to 22 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG_01_0000210 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000210_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G16960
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT1G04645 No alias Plant self-incompatibility protein S1 family 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26795 No alias Plant self-incompatibility protein S1 family 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26796 No alias Plant self-incompatibility protein S1 family 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26797 No alias Plant self-incompatibility protein S1 family 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26798 No alias Plant self-incompatibility protein S1 family 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26799 No alias Plant self-incompatibility protein S1 family 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G56385 No alias Plant self-incompatibility protein S1 family 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G17080 No alias Plant self-incompatibility protein S1 family 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G54925 No alias Plant self-incompatibility protein S1 family 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G55252 No alias Plant self-incompatibility protein S1 family 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G55254 No alias Plant self-incompatibility protein S1 family 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G55665 No alias Plant self-incompatibility protein S1 family 0.16 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G55672 No alias Plant self-incompatibility protein S1 family 0.16 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G57840 No alias Plant self-incompatibility protein S1 family 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G57850 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16195 No alias Plant self-incompatibility protein S1 family 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G24973 No alias Plant self-incompatibility protein S1 family 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G24974 No alias Plant self-incompatibility protein S1 family 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G24975 No alias Plant self-incompatibility protein S1 family 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0006863 purine nucleobase transport RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
MF GO:0098599 palmitoyl hydrolase activity IEP HCCA
MF GO:0098772 molecular function regulator IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT3G16960