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  5. AT3G17380

AT3G17380


Description : TRAF-like family protein


Gene families : OG_01_0000182 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G17380
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AT1G69660 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G20380 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G26260 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0001666 response to hypoxia IEP HCCA
MF GO:0004630 phospholipase D activity IEP HCCA
MF GO:0004816 asparagine-tRNA ligase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005986 sucrose biosynthetic process IEP HCCA
BP GO:0006421 asparaginyl-tRNA aminoacylation IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009736 cytokinin-activated signaling pathway IEP HCCA
BP GO:0009820 alkaloid metabolic process IEP HCCA
BP GO:0009821 alkaloid biosynthetic process IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010413 glucuronoxylan metabolic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
CC GO:0016324 apical plasma membrane IEP HCCA
MF GO:0016688 L-ascorbate peroxidase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0017157 regulation of exocytosis IEP HCCA
BP GO:0019374 galactolipid metabolic process IEP HCCA
BP GO:0019375 galactolipid biosynthetic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
MF GO:0031176 endo-1,4-beta-xylanase activity IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032890 regulation of organic acid transport IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045491 xylan metabolic process IEP HCCA
BP GO:0045492 xylan biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046466 membrane lipid catabolic process IEP HCCA
BP GO:0051046 regulation of secretion IEP HCCA
BP GO:0051648 vesicle localization IEP HCCA
BP GO:0051650 establishment of vesicle localization IEP HCCA
BP GO:0051952 regulation of amine transport IEP HCCA
BP GO:0051955 regulation of amino acid transport IEP HCCA
BP GO:0052545 callose localization IEP HCCA
BP GO:0060627 regulation of vesicle-mediated transport IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA
BP GO:0080143 regulation of amino acid export IEP HCCA
BP GO:0080165 callose deposition in phloem sieve plate IEP HCCA
MF GO:0097599 xylanase activity IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1903530 regulation of secretion by cell IEP HCCA
BP GO:1903789 regulation of amino acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 27 152
IPR002083 MATH/TRAF_dom 180 300
PLAZA 3.0 Dicots AT3G17380