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  5. AT1G13540

AT1G13540


Description : Protein of unknown function (DUF1262)


Gene families : OG_01_0001580 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001580_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G13540
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AT1G13470 No alias Protein of unknown function (DUF1262) 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G13480 No alias Protein of unknown function (DUF1262) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G13490 No alias Protein of unknown function (DUF1262) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G13500 No alias Protein of unknown function (DUF1262) 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G13510 No alias Protein of unknown function (DUF1262) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
CC GO:0000145 exocyst IEP HCCA
BP GO:0000303 response to superoxide IEP HCCA
BP GO:0000305 response to oxygen radical IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006820 anion transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006984 ER-nucleus signaling pathway IEP HCCA
BP GO:0007154 cell communication IEP HCCA
MF GO:0008559 ABC-type xenobiotic transporter activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
MF GO:0009931 calcium-dependent protein serine/threonine kinase activity IEP HCCA
CC GO:0009986 cell surface IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
BP GO:0010045 response to nickel cation IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010315 auxin efflux IEP HCCA
MF GO:0010328 auxin influx transmembrane transporter activity IEP HCCA
MF GO:0010329 auxin efflux transmembrane transporter activity IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
MF GO:0010857 calcium-dependent protein kinase activity IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transport IEP HCCA
BP GO:0015802 basic amino acid transport IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0031219 levanase activity IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of ion transmembrane transporter activity IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of ion transmembrane transport IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042538 hyperosmotic salinity response IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0042886 amide transport IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043269 regulation of ion transport IEP HCCA
BP GO:0044070 regulation of anion transport IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051670 inulinase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060919 auxin influx IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
BP GO:0098754 detoxification IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902456 regulation of stomatal opening IEP HCCA
BP GO:1903959 regulation of anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR010683 DUF1262 23 124
PLAZA 3.0 Dicots AT1G13540