- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50660.1); Has 15095 Blast hits to 11224 proteins in 1051 species: Archae - 223; Bacteria - 1586; Metazoa - 7000; Fungi - 1255; Plants - 746; Viruses - 40; Other Eukaryotes - 4245 (source: NCBI BLink).
Gene families : OG_01_0008621 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008621_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G20350 | |
| Cluster | HCCA: Cluster_252 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| CC | GO:0005886 | plasma membrane | IDA | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000374 | Group III intron splicing | IEP | HCCA |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000910 | cytokinesis | IEP | HCCA |
| BP | GO:0000911 | cytokinesis by cell plate formation | IEP | HCCA |
| BP | GO:0000959 | mitochondrial RNA metabolic process | IEP | HCCA |
| MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003713 | transcription coactivator activity | IEP | HCCA |
| MF | GO:0003964 | RNA-directed DNA polymerase activity | IEP | HCCA |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
| CC | GO:0005739 | mitochondrion | IEP | HCCA |
| CC | GO:0005851 | eukaryotic translation initiation factor 2B complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006278 | RNA-dependent DNA biosynthetic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006284 | base-excision repair | IEP | HCCA |
| BP | GO:0006304 | DNA modification | IEP | HCCA |
| BP | GO:0006305 | DNA alkylation | IEP | HCCA |
| BP | GO:0006306 | DNA methylation | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| BP | GO:0006346 | DNA methylation-dependent heterochromatin assembly | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006446 | regulation of translational initiation | IEP | HCCA |
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0007131 | reciprocal meiotic recombination | IEP | HCCA |
| BP | GO:0007140 | male meiotic nuclear division | IEP | HCCA |
| BP | GO:0007143 | female meiotic nuclear division | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| BP | GO:0009410 | response to xenobiotic stimulus | IEP | HCCA |
| BP | GO:0009615 | response to virus | IEP | HCCA |
| BP | GO:0009688 | abscisic acid biosynthetic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010018 | far-red light signaling pathway | IEP | HCCA |
| BP | GO:0010267 | production of ta-siRNAs involved in RNA interference | IEP | HCCA |
| MF | GO:0010314 | phosphatidylinositol-5-phosphate binding | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010608 | posttranscriptional regulation of gene expression | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0016458 | obsolete gene silencing | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016571 | histone methylation | IEP | HCCA |
| BP | GO:0017148 | negative regulation of translation | IEP | HCCA |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0022412 | cellular process involved in reproduction in multicellular organism | IEP | HCCA |
| BP | GO:0030422 | production of siRNA involved in RNA interference | IEP | HCCA |
| MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
| BP | GO:0031047 | gene silencing by RNA | IEP | HCCA |
| BP | GO:0031050 | dsRNA processing | IEP | HCCA |
| BP | GO:0031507 | heterochromatin assembly | IEP | HCCA |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| BP | GO:0034249 | negative regulation of cellular amide metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0035196 | production of miRNAs involved in gene silencing by miRNA | IEP | HCCA |
| BP | GO:0035825 | homologous recombination | IEP | HCCA |
| BP | GO:0040029 | regulation of gene expression, epigenetic | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| BP | GO:0042753 | positive regulation of circadian rhythm | IEP | HCCA |
| MF | GO:0043130 | ubiquitin binding | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043289 | apocarotenoid biosynthetic process | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0044728 | DNA methylation or demethylation | IEP | HCCA |
| BP | GO:0045814 | negative regulation of gene expression, epigenetic | IEP | HCCA |
| BP | GO:0045947 | negative regulation of translational initiation | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0048449 | floral organ formation | IEP | HCCA |
| BP | GO:0051567 | histone H3-K9 methylation | IEP | HCCA |
| BP | GO:0051568 | histone H3-K4 methylation | IEP | HCCA |
| BP | GO:0051607 | defense response to virus | IEP | HCCA |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
| BP | GO:0061647 | histone H3-K9 modification | IEP | HCCA |
| MF | GO:0070628 | proteasome binding | IEP | HCCA |
| BP | GO:0070828 | heterochromatin organization | IEP | HCCA |
| BP | GO:0070918 | production of small RNA involved in gene silencing by RNA | IEP | HCCA |
| BP | GO:0071490 | cellular response to far red light | IEP | HCCA |
| BP | GO:0071897 | DNA biosynthetic process | IEP | HCCA |
| BP | GO:0080156 | mitochondrial mRNA modification | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0090351 | seedling development | IEP | HCCA |
| BP | GO:0140013 | meiotic nuclear division | IEP | HCCA |
| BP | GO:0140527 | reciprocal homologous recombination | IEP | HCCA |
| BP | GO:0140546 | defense response to symbiont | IEP | HCCA |
| BP | GO:1900864 | mitochondrial RNA modification | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | HCCA |
| BP | GO:1902645 | tertiary alcohol biosynthetic process | IEP | HCCA |
| BP | GO:1905393 | plant organ formation | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT3G20350 |