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  5. AT3G21980

AT3G21980


Description : Domain of unknown function (DUF26)


Gene families : OG_01_0000105 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G21980
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AT3G22040 No alias Domain of unknown function (DUF26) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G20530 No alias Protein with domains of unknown function (DUF26 and DUF1204) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G20540 No alias Protein with domains of unknown function (DUF26 and DUF1204) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G20550 No alias Protein with domains of unknown function (DUF26 and DUF1204) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G20560 No alias Protein with domains of unknown function (DUF26 and DUF1204) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G20570 No alias Protein with domains of unknown function (DUF26 and DUF1204) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G20645 No alias No description available 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004396 hexokinase activity IEP HCCA
MF GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEP HCCA
MF GO:0004550 nucleoside diphosphate kinase activity IEP HCCA
MF GO:0004630 phospholipase D activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005402 carbohydrate:cation symporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009830 cell wall modification involved in abscission IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP HCCA
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0034219 carbohydrate transmembrane transport IEP HCCA
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP HCCA
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP HCCA
BP GO:0044277 cell wall disassembly IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP HCCA
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP HCCA
BP GO:0061013 regulation of mRNA catabolic process IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
MF GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002902 GNK2 124 220
IPR002902 GNK2 37 107
PLAZA 3.0 Dicots AT3G21980