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  5. AT3G23880

AT3G23880


Description : F-box and associated interaction domains-containing protein


Gene families : OG_01_0001903 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G23880
Cluster HCCA: Cluster_150


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
BP GO:0000412 histone peptidyl-prolyl isomerization IEP HCCA
BP GO:0002832 negative regulation of response to biotic stimulus IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005496 steroid binding IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008142 oxysterol binding IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009061 anaerobic respiration IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009531 secondary cell wall IEP HCCA
BP GO:0009593 detection of chemical stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009638 phototropism IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009641 shade avoidance IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009704 de-etiolation IEP HCCA
BP GO:0009720 detection of hormone stimulus IEP HCCA
BP GO:0009726 detection of endogenous stimulus IEP HCCA
BP GO:0009727 detection of ethylene stimulus IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009896 positive regulation of catabolic process IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009959 negative gravitropism IEP HCCA
CC GO:0009986 cell surface IEP HCCA
BP GO:0010017 red or far-red light signaling pathway IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
BP GO:0010030 positive regulation of seed germination IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
BP GO:0010100 negative regulation of photomorphogenesis IEP HCCA
BP GO:0010114 response to red light IEP HCCA
BP GO:0010161 red light signaling pathway IEP HCCA
BP GO:0010187 negative regulation of seed germination IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
MF GO:0010296 prenylcysteine methylesterase activity IEP HCCA
MF GO:0010313 phytochrome binding IEP HCCA
BP GO:0010315 auxin efflux IEP HCCA
BP GO:0010345 suberin biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0010500 transmitting tissue development IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
CC GO:0012506 vesicle membrane IEP HCCA
BP GO:0015976 carbon utilization IEP HCCA
CC GO:0016328 lateral plasma membrane IEP HCCA
MF GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030041 actin filament polymerization IEP HCCA
BP GO:0030162 regulation of proteolysis IEP HCCA
BP GO:0030308 negative regulation of cell growth IEP HCCA
BP GO:0030497 fatty acid elongation IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031331 positive regulation of cellular catabolic process IEP HCCA
BP GO:0031539 positive regulation of anthocyanin metabolic process IEP HCCA
BP GO:0032102 negative regulation of response to external stimulus IEP HCCA
BP GO:0032268 regulation of cellular protein metabolic process IEP HCCA
BP GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032876 negative regulation of DNA endoreduplication IEP HCCA
MF GO:0032934 sterol binding IEP HCCA
BP GO:0034248 regulation of cellular amide metabolic process IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0045732 positive regulation of protein catabolic process IEP HCCA
BP GO:0045862 positive regulation of proteolysis IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0047627 adenylylsulfatase activity IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0048462 carpel formation IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0048766 root hair initiation IEP HCCA
BP GO:0048768 root hair cell tip growth IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
MF GO:0050062 long-chain-fatty-acyl-CoA reductase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051301 cell division IEP HCCA
MF GO:0051723 protein methylesterase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0061136 regulation of proteasomal protein catabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071398 cellular response to fatty acid IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071489 cellular response to red or far red light IEP HCCA
BP GO:0071491 cellular response to red light IEP HCCA
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0080126 ovary septum development IEP HCCA
BP GO:0080167 response to karrikin IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1900140 regulation of seedling development IEP HCCA
BP GO:1900424 regulation of defense response to bacterium IEP HCCA
BP GO:1900425 negative regulation of defense response to bacterium IEP HCCA
BP GO:1901483 regulation of transcription factor catabolic process IEP HCCA
BP GO:1901485 positive regulation of transcription factor catabolic process IEP HCCA
BP GO:1901800 positive regulation of proteasomal protein catabolic process IEP HCCA
BP GO:1903050 regulation of proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:1903052 positive regulation of proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:1903362 regulation of cellular protein catabolic process IEP HCCA
BP GO:1903364 positive regulation of cellular protein catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905328 plant septum development IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000038 regulation of stomatal complex development IEP HCCA
BP GO:2000058 regulation of ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 215 297
IPR001810 F-box_dom 9 47
PLAZA 3.0 Dicots AT3G23880