AT3G24800

Description : proteolysis 1

Gene families : OG_01_0002771 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002771_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G24800
Cluster	HCCA: Cluster_22

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	TAS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	TAS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	TAS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000578	embryonic axis specification	IEP	HCCA
BP	GO:0002229	defense response to oomycetes	IEP	HCCA
BP	GO:0002239	response to oomycetes	IEP	HCCA
MF	GO:0003684	damaged DNA binding	IEP	HCCA
MF	GO:0003691	double-stranded telomeric DNA binding	IEP	HCCA
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	HCCA
MF	GO:0003964	RNA-directed DNA polymerase activity	IEP	HCCA
MF	GO:0005200	structural constituent of cytoskeleton	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005795	Golgi stack	IEP	HCCA
CC	GO:0005876	spindle microtubule	IEP	HCCA
CC	GO:0005885	Arp2/3 protein complex	IEP	HCCA
BP	GO:0006084	acetyl-CoA metabolic process	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006261	DNA-dependent DNA replication	IEP	HCCA
BP	GO:0006278	RNA-dependent DNA biosynthetic process	IEP	HCCA
BP	GO:0006284	base-excision repair	IEP	HCCA
BP	GO:0006370	7-methylguanosine mRNA capping	IEP	HCCA
BP	GO:0006521	regulation of cellular amino acid metabolic process	IEP	HCCA
BP	GO:0006637	acyl-CoA metabolic process	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
CC	GO:0008541	proteasome regulatory particle, lid subcomplex	IEP	HCCA
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA
BP	GO:0009452	7-methylguanosine RNA capping	IEP	HCCA
BP	GO:0009560	embryo sac egg cell differentiation	IEP	HCCA
BP	GO:0009739	response to gibberellin	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016229	steroid dehydrogenase activity	IEP	HCCA
CC	GO:0019005	SCF ubiquitin ligase complex	IEP	HCCA
BP	GO:0019321	pentose metabolic process	IEP	HCCA
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	HCCA
MF	GO:0030371	translation repressor activity	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
MF	GO:0032182	ubiquitin-like protein binding	IEP	HCCA
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEP	HCCA
BP	GO:0033238	regulation of cellular amine metabolic process	IEP	HCCA
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034635	glutathione transport	IEP	HCCA
BP	GO:0035383	thioester metabolic process	IEP	HCCA
BP	GO:0035864	response to potassium ion	IEP	HCCA
BP	GO:0036260	RNA capping	IEP	HCCA
MF	GO:0042162	telomeric DNA binding	IEP	HCCA
BP	GO:0042732	D-xylose metabolic process	IEP	HCCA
BP	GO:0042939	tripeptide transport	IEP	HCCA
MF	GO:0043047	single-stranded telomeric DNA binding	IEP	HCCA
MF	GO:0043130	ubiquitin binding	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0045003	double-strand break repair via synthesis-dependent strand annealing	IEP	HCCA
MF	GO:0047012	sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
MF	GO:0051011	microtubule minus-end binding	IEP	HCCA
MF	GO:0070628	proteasome binding	IEP	HCCA
BP	GO:0071897	DNA biosynthetic process	IEP	HCCA
BP	GO:0071985	multivesicular body sorting pathway	IEP	HCCA
BP	GO:0072337	modified amino acid transport	IEP	HCCA
CC	GO:0098791	Golgi apparatus subcompartment	IEP	HCCA
MF	GO:0098847	sequence-specific single stranded DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000433	Znf_ZZ	306	347
IPR027370	Znf-RING_LisH	192	228

External Links

PLAZA 3.0 Dicots	AT3G24800

AT3G24800

Expression Profile

Co-expression Networks

Functional Annotation