1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G25750

AT3G25750


Description : F-box family protein with a domain of unknown function (DUF295)


Gene families : OG_01_0000320 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G25750
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT1G44080 No alias F-box family protein with a domain of unknown function (DUF295) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G65770 No alias ascorbic acid mannose pathway regulator 1 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G24255 No alias unknown protein; CONTAINS InterPro DOMAIN/s: Protein of... 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G26160 No alias F-box family protein with a domain of unknown function (DUF295) 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G35733 No alias F-box family protein with a domain of unknown function (DUF295) 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006863 purine nucleobase transport IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009736 cytokinin-activated signaling pathway IEP HCCA
BP GO:0015851 nucleobase transport IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0045309 protein phosphorylated amino acid binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051219 phosphoprotein binding IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
MF GO:1990135 flavonoid sulfotransferase activity IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 6 45
IPR005174 DUF295 270 320
PLAZA 3.0 Dicots AT3G25750