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AT3G26630


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0007950 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007950_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G26630
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT2G44880 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0000302 response to reactive oxygen species IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005343 organic acid:sodium symporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP HCCA
BP GO:0006354 DNA-templated transcription, elongation IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006879 cellular iron ion homeostasis IEP HCCA
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
MF GO:0008508 bile acid:sodium symporter activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009408 response to heat IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
MF GO:0015125 bile acid transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:cation symporter activity IEP HCCA
MF GO:0015355 secondary active monocarboxylate transmembrane transporter activity IEP HCCA
MF GO:0015370 solute:sodium symporter activity IEP HCCA
BP GO:0016093 polyprenol metabolic process IEP HCCA
BP GO:0016094 polyprenol biosynthetic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
BP GO:0019348 dolichol metabolic process IEP HCCA
BP GO:0019408 dolichol biosynthetic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active ion transmembrane transporter activity IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0031350 intrinsic component of plastid membrane IEP HCCA
CC GO:0031351 integral component of plastid membrane IEP HCCA
CC GO:0031354 intrinsic component of plastid outer membrane IEP HCCA
CC GO:0031355 integral component of plastid outer membrane IEP HCCA
CC GO:0031358 intrinsic component of chloroplast outer membrane IEP HCCA
CC GO:0031359 integral component of chloroplast outer membrane IEP HCCA
BP GO:0031425 chloroplast RNA processing IEP HCCA
BP GO:0031426 polycistronic mRNA processing IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0034605 cellular response to heat IEP HCCA
MF GO:0035250 UDP-galactosyltransferase activity IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042550 photosystem I stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045140 inositol phosphoceramide synthase activity IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
MF GO:0046480 galactolipid galactosyltransferase activity IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0080148 negative regulation of response to water deprivation IEP HCCA
BP GO:0080186 developmental vegetative growth IEP HCCA
MF GO:0140161 monocarboxylate:sodium symporter activity IEP HCCA
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP HCCA
BP GO:2000070 regulation of response to water deprivation IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 214 260
IPR002885 Pentatricopeptide_repeat 317 364
IPR002885 Pentatricopeptide_repeat 158 183
IPR002885 Pentatricopeptide_repeat 84 110
IPR002885 Pentatricopeptide_repeat 290 315
PLAZA 3.0 Dicots AT3G26630