1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G26930

AT3G26930


Description : Protein with RNI-like/FBD-like domains


Gene families : OG_01_0000027 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G26930
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AT1G50980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G55030 No alias RNI-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G10750 No alias FBD domain family 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G12840 No alias unknown protein; Has 0 Blast hits to 0 proteins in 0... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49020 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49030 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49040 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49045 No alias No description available 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49480 No alias Protein with RNI-like/FBD-like domains 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G52690 No alias RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G09920 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G26350 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38570 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52460 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56325 No alias FBD-like domain family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56370 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56380 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56390 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56400 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56430 No alias F-box/FBD-like domains containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56452 No alias FBD-like domain family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56560 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56570 No alias Leucine-rich repeat (LRR) family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62970 No alias Protein with RNI-like/FBD-like domains 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
CC GO:0001673 male germ cell nucleus IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0001933 negative regulation of protein phosphorylation IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
BP GO:0006323 DNA packaging IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006469 negative regulation of protein kinase activity IEP HCCA
CC GO:0008278 cohesin complex IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
BP GO:0010032 meiotic chromosome condensation IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0030332 cyclin binding IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
BP GO:0032269 negative regulation of cellular protein metabolic process IEP HCCA
BP GO:0033673 negative regulation of kinase activity IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0042326 negative regulation of phosphorylation IEP HCCA
CC GO:0043073 germ cell nucleus IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
MF GO:0047268 galactinol-raffinose galactosyltransferase activity IEP HCCA
BP GO:0048240 sperm capacitation IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051177 meiotic sister chromatid cohesion IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0051316 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051348 negative regulation of transferase activity IEP HCCA
BP GO:0051455 monopolar spindle attachment to meiosis I kinetochore IEP HCCA
BP GO:0051754 meiotic sister chromatid cohesion, centromeric IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
BP GO:0070601 centromeric sister chromatid cohesion IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0071901 negative regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:2000008 regulation of protein localization to cell surface IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006566 FBD 314 360
IPR013101 Leu-rich_rpt_2 117 141
PLAZA 3.0 Dicots AT3G26930