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  5. AT3G27040

AT3G27040


Description : Meprin and TRAF (MATH) homology domain-containing protein


Gene families : OG_01_0000081 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G27040
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT1G31380 No alias TRAF-like family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G05410 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42465 No alias No description available 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G44805 No alias TRAF-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58260 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58290 No alias TRAF-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58340 No alias TRAF-like family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58360 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58370 No alias TRAF-like family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58400 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
BP GO:2000008 regulation of protein localization to cell surface IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 14 74
IPR002083 MATH/TRAF_dom 101 221
PLAZA 3.0 Dicots AT3G27040