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  5. AT3G27480

AT3G27480


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG_01_0000041 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G27480
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
AT1G69150 No alias Cysteine/Histidine-rich C1 domain family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G04680 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G45840 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G01925 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G02180 No alias DC1 domain-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G02190 No alias Cysteine/Histidine-rich C1 domain family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G11550 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13992 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16015 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22355 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G26190 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G29624 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39471 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G42840 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G54030 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G59920 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0004372 glycine hydroxymethyltransferase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of ion transmembrane transporter activity IEP HCCA
BP GO:0044070 regulation of anion transport IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0071944 cell periphery IEP HCCA
BP GO:1903959 regulation of anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 60 108
IPR004146 DC1 177 224
IPR004146 DC1 541 589
IPR004146 DC1 291 338
IPR004146 DC1 238 281
IPR004146 DC1 8 48
IPR004146 DC1 375 421
PLAZA 3.0 Dicots AT3G27480