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  5. AT3G28223

AT3G28223


Description : F-box family protein


Gene families : OG_01_0001599 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001599_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G28223
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT1G15680 No alias F-box family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G26010 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G28330 No alias F-box family protein-related 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G48220 No alias BEST Arabidopsis thaliana protein match is: F-box family... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22430 No alias F-box family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 15 54
PLAZA 3.0 Dicots AT3G28223