AT3G28610

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG_01_0000108 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G28610

Target	Alias	Description	ECC score	Gene Family Method
AT3G29800	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G30250	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G17740	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G17750	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
CC	GO:0016020	membrane	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISS	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042991	obsolete transcription factor import into nucleus	RCA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005244	voltage-gated ion channel activity	IEP	HCCA
MF	GO:0005253	anion channel activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
MF	GO:0008308	voltage-gated anion channel activity	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
MF	GO:0022832	voltage-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	241	381
IPR025753	AAA_N_dom	46	128

External Links

PLAZA 3.0 Dicots	AT3G28610