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  5. AT3G28700

AT3G28700


Description : Protein of unknown function (DUF185)


Gene families : OG_01_0006041 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G28700
Cluster HCCA: Cluster_168


Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
MF GO:0008270 zinc ion binding IDA Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
BP GO:0045333 cellular respiration RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
CC GO:0000932 P-body IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004407 histone deacetylase activity IEP HCCA
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP HCCA
MF GO:0005344 oxygen carrier activity IEP HCCA
MF GO:0005354 galactose transmembrane transporter activity IEP HCCA
MF GO:0005539 glycosaminoglycan binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006446 regulation of translational initiation IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006626 protein targeting to mitochondrion IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010262 somatic embryogenesis IEP HCCA
CC GO:0010369 chromocenter IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010608 posttranscriptional regulation of gene expression IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015149 hexose transmembrane transporter activity IEP HCCA
BP GO:0015669 gas transport IEP HCCA
BP GO:0015671 oxygen transport IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017151 DEAD/H-box RNA helicase binding IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA IEP HCCA
BP GO:0031099 regeneration IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0033558 protein deacetylase activity IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0035064 methylated histone binding IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
CC GO:0035770 ribonucleoprotein granule IEP HCCA
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
MF GO:0042834 peptidoglycan binding IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045893 positive regulation of transcription, DNA-templated IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
MF GO:0050072 m7G(5')pppN diphosphatase activity IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051445 regulation of meiotic cell cycle IEP HCCA
BP GO:0051446 positive regulation of meiotic cell cycle IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
MF GO:0070628 proteasome binding IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
BP GO:0110154 RNA decapping IEP HCCA
BP GO:0110156 methylguanosine-cap decapping IEP HCCA
MF GO:0140030 modification-dependent protein binding IEP HCCA
MF GO:0140034 methylation-dependent protein binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003788 NDUFAF7 136 393
PLAZA 3.0 Dicots AT3G28700