AT3G29020

Description : myb domain protein 110

Gene families : OG_01_0000049 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G29020
Cluster	HCCA: Cluster_116

Target	Alias	Description	ECC score	Gene Family Method
AT1G26780	No alias	myb domain protein 117	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_10360V3.1	No alias	myb domain protein 105	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_24650V3.1	No alias	myb domain protein 109	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002237	response to molecule of bacterial origin	IEP	HCCA
BP	GO:0003002	regionalization	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
BP	GO:0006308	DNA catabolic process	IEP	HCCA
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
BP	GO:0009553	embryo sac development	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009860	pollen tube growth	IEP	HCCA
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0009900	dehiscence	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0009913	epidermal cell differentiation	IEP	HCCA
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	HCCA
BP	GO:0010047	fruit dehiscence	IEP	HCCA
BP	GO:0010093	specification of floral organ identity	IEP	HCCA
BP	GO:0010103	stomatal complex morphogenesis	IEP	HCCA
BP	GO:0010160	formation of animal organ boundary	IEP	HCCA
CC	GO:0010169	thioglucosidase complex	IEP	HCCA
MF	GO:0010180	thioglucosidase binding	IEP	HCCA
BP	GO:0010234	anther wall tapetum cell fate specification	IEP	HCCA
BP	GO:0010417	glucuronoxylan biosynthetic process	IEP	HCCA
BP	GO:0010430	fatty acid omega-oxidation	IEP	HCCA
BP	GO:0010500	transmitting tissue development	IEP	HCCA
CC	GO:0016324	apical plasma membrane	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0030855	epithelial cell differentiation	IEP	HCCA
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0034599	cellular response to oxidative stress	IEP	HCCA
BP	GO:0042127	regulation of cell population proliferation	IEP	HCCA
CC	GO:0042645	mitochondrial nucleoid	IEP	HCCA
MF	GO:0046593	mandelonitrile lyase activity	IEP	HCCA
BP	GO:0048314	embryo sac morphogenesis	IEP	HCCA
CC	GO:0048353	primary endosperm nucleus	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048437	floral organ development	IEP	HCCA
BP	GO:0048440	carpel development	IEP	HCCA
BP	GO:0048441	petal development	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048446	petal morphogenesis	IEP	HCCA
BP	GO:0048449	floral organ formation	IEP	HCCA
BP	GO:0048451	petal formation	IEP	HCCA
BP	GO:0048453	sepal formation	IEP	HCCA
BP	GO:0048462	carpel formation	IEP	HCCA
BP	GO:0048467	gynoecium development	IEP	HCCA
BP	GO:0048481	plant ovule development	IEP	HCCA
BP	GO:0048482	plant ovule morphogenesis	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048530	fruit morphogenesis	IEP	HCCA
BP	GO:0048598	embryonic morphogenesis	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0048859	formation of anatomical boundary	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
BP	GO:0051131	chaperone-mediated protein complex assembly	IEP	HCCA
BP	GO:0051260	protein homooligomerization	IEP	HCCA
BP	GO:0065001	specification of axis polarity	IEP	HCCA
BP	GO:0070407	oxidation-dependent protein catabolic process	IEP	HCCA
BP	GO:0080051	cutin transport	IEP	HCCA
BP	GO:0080060	integument development	IEP	HCCA
BP	GO:0080172	petal epidermis patterning	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
BP	GO:0090626	plant epidermis morphogenesis	IEP	HCCA
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
BP	GO:0090701	specification of plant organ identity	IEP	HCCA
CC	GO:0098590	plasma membrane region	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
BP	GO:1905393	plant organ formation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	117	161
IPR001005	SANT/Myb	65	110

External Links

PLAZA 3.0 Dicots	AT3G29020

AT3G29020

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation