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AT3G29100


Description : vesicle transport V-snare 13


Gene families : OG_01_0001270 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G29100
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
Cre13.g577500 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding TAS Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
BP GO:0006891 intra-Golgi vesicle-mediated transport TAS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
CC GO:0000164 protein phosphatase type 1 complex IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
CC GO:0000815 ESCRT III complex IEP HCCA
CC GO:0000930 gamma-tubulin complex IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005665 RNA polymerase II, core complex IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005828 kinetochore microtubule IEP HCCA
CC GO:0005876 spindle microtubule IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007052 mitotic spindle organization IEP HCCA
BP GO:0007163 establishment or maintenance of cell polarity IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
CC GO:0009574 preprophase band IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0010923 negative regulation of phosphatase activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0030041 actin filament polymerization IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0031209 SCAR complex IEP HCCA
CC GO:0031371 ubiquitin conjugating enzyme complex IEP HCCA
CC GO:0031372 UBC13-MMS2 complex IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
BP GO:0032269 negative regulation of cellular protein metabolic process IEP HCCA
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0035305 negative regulation of dephosphorylation IEP HCCA
BP GO:0035308 negative regulation of protein dephosphorylation IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
BP GO:0051418 microtubule nucleation by microtubule organizing center IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0071944 cell periphery IEP HCCA
CC GO:0072686 mitotic spindle IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902850 microtubule cytoskeleton organization involved in mitosis IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N 26 64
PLAZA 3.0 Dicots AT3G29100