AT3G29320

Description : Glycosyl transferase, family 35

Gene families : OG_01_0000703 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000703_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G29320
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method
Cre07.g336950	No alias	Carbohydrate metabolism.starch...	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g552200	No alias	Carbohydrate metabolism.starch...	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g09490.1	No alias	plastidial alpha-glucan phosphorylase	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004645	1,4-alpha-oligoglucan phosphorylase activity	IMP	Interproscan
MF	GO:0004645	1,4-alpha-oligoglucan phosphorylase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	IEP	Interproscan
BP	GO:0009409	response to cold	RCA	Interproscan
BP	GO:0009414	response to water deprivation	IMP	Interproscan
BP	GO:0009415	response to water	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	TAS	Interproscan
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	ISS	Interproscan
MF	GO:0016758	hexosyltransferase activity	None	Extended
BP	GO:0019252	starch biosynthetic process	RCA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042742	defense response to bacterium	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	IEP	HCCA
BP	GO:0000025	maltose catabolic process	IEP	HCCA
BP	GO:0000272	polysaccharide catabolic process	IEP	HCCA
BP	GO:0000373	Group II intron splicing	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004133	glycogen debranching enzyme activity	IEP	HCCA
MF	GO:0004134	4-alpha-glucanotransferase activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004556	alpha-amylase activity	IEP	HCCA
MF	GO:0004567	beta-mannosidase activity	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
BP	GO:0005983	starch catabolic process	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0007623	circadian rhythm	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008422	beta-glucosidase activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009251	glucan catabolic process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009313	oligosaccharide catabolic process	IEP	HCCA
CC	GO:0009501	amyloplast	IEP	HCCA
CC	GO:0009509	chromoplast	IEP	HCCA
CC	GO:0009513	etioplast	IEP	HCCA
CC	GO:0009537	proplastid	IEP	HCCA
CC	GO:0009543	chloroplast thylakoid lumen	IEP	HCCA
BP	GO:0009657	plastid organization	IEP	HCCA
BP	GO:0009658	chloroplast organization	IEP	HCCA
BP	GO:0010020	chloroplast fission	IEP	HCCA
BP	GO:0010021	amylopectin biosynthetic process	IEP	HCCA
BP	GO:0010239	chloroplast mRNA processing	IEP	HCCA
MF	GO:0010297	heteropolysaccharide binding	IEP	HCCA
CC	GO:0010368	chloroplast isoamylase complex	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0015923	mannosidase activity	IEP	HCCA
MF	GO:0015926	glucosidase activity	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016160	amylase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0019156	isoamylase activity	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
BP	GO:0031425	chloroplast RNA processing	IEP	HCCA
CC	GO:0031978	plastid thylakoid lumen	IEP	HCCA
CC	GO:0043033	isoamylase complex	IEP	HCCA
BP	GO:0043085	positive regulation of catalytic activity	IEP	HCCA
BP	GO:0043572	plastid fission	IEP	HCCA
MF	GO:0043621	protein self-association	IEP	HCCA
BP	GO:0044093	positive regulation of molecular function	IEP	HCCA
BP	GO:0044247	cellular polysaccharide catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	HCCA
BP	GO:0045292	mRNA cis splicing, via spliceosome	IEP	HCCA
BP	GO:0046352	disaccharide catabolic process	IEP	HCCA
MF	GO:0047668	amygdalin beta-glucosidase activity	IEP	HCCA
BP	GO:0048511	rhythmic process	IEP	HCCA
BP	GO:0048564	photosystem I assembly	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
BP	GO:0071478	cellular response to radiation	IEP	HCCA
BP	GO:0071482	cellular response to light stimulus	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0080079	cellobiose glucosidase activity	IEP	HCCA
MF	GO:0080081	4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	IEP	HCCA
MF	GO:0080082	esculin beta-glucosidase activity	IEP	HCCA
MF	GO:0080083	beta-gentiobiose beta-glucosidase activity	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:2000896	amylopectin metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000811	Glyco_trans_35	181	956

External Links

PLAZA 3.0 Dicots	AT3G29320

AT3G29320

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation