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  5. AT3G30540

AT3G30540


Description : Glycosyl hydrolase superfamily protein


Gene families : OG_01_0000370 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G30540
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Mp8g06310.1 No alias endo-beta-1,4-mannanase 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_23790V3.1 No alias Glycosyl hydrolase superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
BP GO:0009913 epidermal cell differentiation IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
BP GO:0030855 epithelial cell differentiation IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 76 293
PLAZA 3.0 Dicots AT3G30540