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  5. AT3G44790

AT3G44790


Description : TRAF-like family protein


Gene families : OG_01_0000081 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G44790
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AT1G31380 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G05410 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42455 No alias No description available 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42470 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42475 No alias No description available 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42480 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G44805 No alias TRAF-like superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58240 No alias TRAF-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58260 No alias TRAF-like family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58290 No alias TRAF-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58340 No alias TRAF-like family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58360 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58420 No alias TRAF-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58440 No alias TRAF-like superfamily protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0005244 voltage-gated ion channel activity IEP HCCA
MF GO:0005253 anion channel activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008308 voltage-gated anion channel activity IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 10 121
PLAZA 3.0 Dicots AT3G44790