AT3G45300


Description : isovaleryl-CoA-dehydrogenase


Gene families : OG_01_0008152 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008152_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G45300
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cre06.g296400 No alias Amino acid metabolism.degradation.branched-chain amino... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g15810.1 No alias isovaleryl-CoA-dehydrogenase 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_2020V3.1 No alias isovaleryl-CoA-dehydrogenase 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IDA Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005759 mitochondrial matrix IDA Interproscan
BP GO:0006552 leucine catabolic process IDA Interproscan
BP GO:0006552 leucine catabolic process IMP Interproscan
MF GO:0008470 isovaleryl-CoA dehydrogenase activity IDA Interproscan
MF GO:0008470 isovaleryl-CoA dehydrogenase activity ISS Interproscan
BP GO:0009083 branched-chain amino acid catabolic process IMP Interproscan
BP GO:0009744 response to sucrose RCA Interproscan
BP GO:0009750 response to fructose RCA Interproscan
Type GO Term Name Evidence Source
MF GO:0000035 acyl binding IEP HCCA
BP GO:0000209 protein polyubiquitination IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
MF GO:0002020 protease binding IEP HCCA
BP GO:0003002 regionalization IEP HCCA
MF GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity IEP HCCA
MF GO:0003868 4-hydroxyphenylpyruvate dioxygenase activity IEP HCCA
MF GO:0003878 ATP citrate synthase activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP HCCA
MF GO:0004075 biotin carboxylase activity IEP HCCA
MF GO:0004084 branched-chain-amino-acid transaminase activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004485 methylcrotonoyl-CoA carboxylase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004679 AMP-activated protein kinase activity IEP HCCA
MF GO:0004738 pyruvate dehydrogenase activity IEP HCCA
MF GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity IEP HCCA
MF GO:0004792 thiosulfate sulfurtransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004930 G protein-coupled receptor activity IEP HCCA
MF GO:0005275 amine transmembrane transporter activity IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005354 galactose transmembrane transporter activity IEP HCCA
MF GO:0005402 carbohydrate:cation symporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005773 vacuole IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006085 acetyl-CoA biosynthetic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006775 fat-soluble vitamin metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0007568 aging IEP HCCA
BP GO:0007602 phototransduction IEP HCCA
MF GO:0008020 G protein-coupled photoreceptor activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008219 cell death IEP HCCA
MF GO:0009045 xylose isomerase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009310 amine catabolic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
CC GO:0009346 ATP-independent citrate lyase complex IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009585 red, far-red light phototransduction IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009638 phototropism IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009641 shade avoidance IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009838 abscission IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
MF GO:0009881 photoreceptor activity IEP HCCA
MF GO:0009883 red or far-red light photoreceptor activity IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009896 positive regulation of catabolic process IEP HCCA
BP GO:0009954 proximal/distal pattern formation IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010017 red or far-red light signaling pathway IEP HCCA
BP GO:0010071 root meristem specification IEP HCCA
BP GO:0010078 maintenance of root meristem identity IEP HCCA
BP GO:0010161 red light signaling pathway IEP HCCA
BP GO:0010189 vitamin E biosynthetic process IEP HCCA
BP GO:0010201 response to continuous far red light stimulus by the high-irradiance response system IEP HCCA
BP GO:0010203 response to very low fluence red light stimulus IEP HCCA
BP GO:0010214 seed coat development IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
BP GO:0010224 response to UV-B IEP HCCA
BP GO:0010227 floral organ abscission IEP HCCA
BP GO:0010236 plastoquinone biosynthetic process IEP HCCA
BP GO:0010268 brassinosteroid homeostasis IEP HCCA
BP GO:0010375 stomatal complex patterning IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0010506 regulation of autophagy IEP HCCA
BP GO:0010508 positive regulation of autophagy IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 posttranscriptional regulation of gene expression IEP HCCA
BP GO:0010623 programmed cell death involved in cell development IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015149 hexose transmembrane transporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0015749 monosaccharide transmembrane transport IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0015976 carbon utilization IEP HCCA
BP GO:0016032 viral process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016417 S-acyltransferase activity IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016783 sulfurtransferase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0031331 positive regulation of cellular catabolic process IEP HCCA
CC GO:0031463 Cul3-RING ubiquitin ligase complex IEP HCCA
MF GO:0031516 far-red light photoreceptor activity IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034219 carbohydrate transmembrane transport IEP HCCA
BP GO:0034249 negative regulation of cellular amide metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0034613 cellular protein localization IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0035384 thioester biosynthetic process IEP HCCA
MF GO:0035671 enone reductase activity IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042360 vitamin E metabolic process IEP HCCA
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042402 cellular biogenic amine catabolic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0043617 cellular response to sucrose starvation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044000 movement in host IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0044766 multi-organism transport IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0045309 protein phosphorylated amino acid binding IEP HCCA
BP GO:0045739 positive regulation of DNA repair IEP HCCA
BP GO:0046459 short-chain fatty acid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046739 transport of virus in multicellular host IEP HCCA
BP GO:0046740 transport of virus in host, cell to cell IEP HCCA
BP GO:0046794 transport of virus IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046909 obsolete intermembrane transport IEP HCCA
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048102 autophagic cell death IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048439 flower morphogenesis IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048657 anther wall tapetum cell differentiation IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
BP GO:0051054 positive regulation of DNA metabolic process IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
MF GO:0051219 phosphoprotein binding IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0052126 movement in host environment IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055088 lipid homeostasis IEP HCCA
BP GO:0055122 response to very low light intensity stimulus IEP HCCA
BP GO:0060147 regulation of posttranscriptional gene silencing IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0060964 regulation of gene silencing by miRNA IEP HCCA
BP GO:0060966 regulation of gene silencing by RNA IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071483 cellular response to blue light IEP HCCA
BP GO:0071489 cellular response to red or far red light IEP HCCA
BP GO:0071491 cellular response to red light IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0071616 acyl-CoA biosynthetic process IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0090342 regulation of cell aging IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:1902579 multi-organism localization IEP HCCA
BP GO:1902586 multi-organism intercellular transport IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
BP GO:2001022 positive regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR009075 AcylCo_DH/oxidase_C 257 405
IPR006091 Acyl-CoA_Oxase/DH_cen-dom 150 245
IPR013786 AcylCoA_DH/ox_N 33 146
PLAZA 3.0 Dicots AT3G45300