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  5. AT3G46800

AT3G46800


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG_01_0000041 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G46800
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT4G01350 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13992 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16015 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G26190 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39471 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006879 cellular iron ion homeostasis IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055072 iron ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 563 611
IPR004146 DC1 310 357
IPR004146 DC1 392 437
IPR004146 DC1 62 105
IPR004146 DC1 510 552
IPR004146 DC1 258 300
PLAZA 3.0 Dicots AT3G46800