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  5. AT3G46810

AT3G46810


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG_01_0000041 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G46810
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT1G69150 No alias Cysteine/Histidine-rich C1 domain family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G04680 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G19660 No alias Cysteine/Histidine-rich C1 domain family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G01925 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G11390 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13992 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16015 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G26190 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G29624 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G37620 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39471 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G54040 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005275 amine transmembrane transporter activity IEP HCCA
MF GO:0005496 steroid binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010315 auxin efflux IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transport IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
MF GO:0090411 brassinosteroid binding IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 183 235
IPR004146 DC1 301 348
IPR004146 DC1 122 170
IPR004146 DC1 556 604
IPR004146 DC1 249 291
IPR004146 DC1 383 430
IPR004146 DC1 63 103
PLAZA 3.0 Dicots AT3G46810