AT3G47390

Description : cytidine/deoxycytidylate deaminase family protein

Gene families : OG_01_0004597 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004597_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G47390
Cluster	HCCA: Cluster_79

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp8g14730.1	No alias	pyrimidine reductase	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_670V3.1	No alias	cytidine/deoxycytidylate deaminase family protein	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
MF	GO:0008703	5-amino-6-(5-phosphoribosylamino)uracil reductase activity	IDA	Interproscan
MF	GO:0008703	5-amino-6-(5-phosphoribosylamino)uracil reductase activity	NAS	Interproscan
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	IMP	Interproscan
BP	GO:0009657	plastid organization	None	Extended
BP	GO:0009658	chloroplast organization	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
MF	GO:0016787	hydrolase activity	ISS	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042726	flavin-containing compound metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046443	FAD metabolic process	IMP	Interproscan
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072387	flavin adenine dinucleotide metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000082	G1/S transition of mitotic cell cycle	IEP	HCCA
BP	GO:0000096	sulfur amino acid metabolic process	IEP	HCCA
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	HCCA
CC	GO:0000139	Golgi membrane	IEP	HCCA
CC	GO:0000164	protein phosphatase type 1 complex	IEP	HCCA
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	HCCA
MF	GO:0003948	N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity	IEP	HCCA
MF	GO:0004067	asparaginase activity	IEP	HCCA
MF	GO:0004124	cysteine synthase activity	IEP	HCCA
MF	GO:0004564	beta-fructofuranosidase activity	IEP	HCCA
BP	GO:0005987	sucrose catabolic process	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006284	base-excision repair	IEP	HCCA
BP	GO:0006516	glycoprotein catabolic process	IEP	HCCA
BP	GO:0006520	cellular amino acid metabolic process	IEP	HCCA
BP	GO:0006528	asparagine metabolic process	IEP	HCCA
BP	GO:0006530	asparagine catabolic process	IEP	HCCA
BP	GO:0006534	cysteine metabolic process	IEP	HCCA
BP	GO:0006555	methionine metabolic process	IEP	HCCA
BP	GO:0006651	diacylglycerol biosynthetic process	IEP	HCCA
BP	GO:0006722	triterpenoid metabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0007021	tubulin complex assembly	IEP	HCCA
BP	GO:0007031	peroxisome organization	IEP	HCCA
MF	GO:0008195	phosphatidate phosphatase activity	IEP	HCCA
MF	GO:0008252	nucleotidase activity	IEP	HCCA
MF	GO:0008253	5'-nucleotidase activity	IEP	HCCA
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	HCCA
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	HCCA
BP	GO:0009065	glutamine family amino acid catabolic process	IEP	HCCA
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	HCCA
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009086	methionine biosynthetic process	IEP	HCCA
BP	GO:0009100	glycoprotein metabolic process	IEP	HCCA
BP	GO:0009313	oligosaccharide catabolic process	IEP	HCCA
MF	GO:0010283	pinoresinol reductase activity	IEP	HCCA
MF	GO:0015099	nickel cation transmembrane transporter activity	IEP	HCCA
BP	GO:0015675	nickel cation transport	IEP	HCCA
BP	GO:0016104	triterpenoid biosynthetic process	IEP	HCCA
MF	GO:0016657	oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0019104	DNA N-glycosylase activity	IEP	HCCA
BP	GO:0019344	cysteine biosynthetic process	IEP	HCCA
BP	GO:0019742	pentacyclic triterpenoid metabolic process	IEP	HCCA
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0031425	chloroplast RNA processing	IEP	HCCA
BP	GO:0033345	asparagine catabolic process via L-aspartate	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0044770	cell cycle phase transition	IEP	HCCA
BP	GO:0044772	mitotic cell cycle phase transition	IEP	HCCA
BP	GO:0044843	cell cycle G1/S phase transition	IEP	HCCA
MF	GO:0045309	protein phosphorylated amino acid binding	IEP	HCCA
BP	GO:0046339	diacylglycerol metabolic process	IEP	HCCA
BP	GO:0046352	disaccharide catabolic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046460	neutral lipid biosynthetic process	IEP	HCCA
BP	GO:0046463	acylglycerol biosynthetic process	IEP	HCCA
MF	GO:0051219	phosphoprotein binding	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002734	RibDG_C	188	390
IPR002125	CMP_dCMP_dom	32	128
IPR012816	NADAR	483	584

External Links

PLAZA 3.0 Dicots	AT3G47390

AT3G47390

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation