AT3G47710

Description : BANQUO 3

Gene families : OG_01_0004862 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004862_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G47710
Cluster	HCCA: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
AT3G28857	No alias	basic helix-loop-helix (bHLH) DNA-binding family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G15160	No alias	BANQUO 2	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39860	No alias	basic helix-loop-helix (bHLH) DNA-binding family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009640	photomorphogenesis	IMP	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0040034	regulation of development, heterochronic	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048506	regulation of timing of meristematic phase transition	None	Extended
BP	GO:0048509	regulation of meristem development	None	Extended
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IMP	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	IEP	HCCA
MF	GO:0004655	porphobilinogen synthase activity	IEP	HCCA
MF	GO:0005102	signaling receptor binding	IEP	HCCA
CC	GO:0005615	extracellular space	IEP	HCCA
BP	GO:0006749	glutathione metabolic process	IEP	HCCA
MF	GO:0008083	growth factor activity	IEP	HCCA
MF	GO:0008825	cyclopropane-fatty-acyl-phospholipid synthase activity	IEP	HCCA
BP	GO:0009786	regulation of asymmetric cell division	IEP	HCCA
BP	GO:0009828	plant-type cell wall loosening	IEP	HCCA
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0009913	epidermal cell differentiation	IEP	HCCA
BP	GO:0009957	epidermal cell fate specification	IEP	HCCA
BP	GO:0009958	positive gravitropism	IEP	HCCA
BP	GO:0010086	embryonic root morphogenesis	IEP	HCCA
BP	GO:0010091	trichome branching	IEP	HCCA
BP	GO:0017145	stem cell division	IEP	HCCA
MF	GO:0030545	signaling receptor regulator activity	IEP	HCCA
MF	GO:0030546	signaling receptor activator activity	IEP	HCCA
BP	GO:0030855	epithelial cell differentiation	IEP	HCCA
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	HCCA
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0045165	cell fate commitment	IEP	HCCA
BP	GO:0045770	positive regulation of asymmetric cell division	IEP	HCCA
MF	GO:0048018	receptor ligand activity	IEP	HCCA
BP	GO:0048103	somatic stem cell division	IEP	HCCA
BP	GO:0048598	embryonic morphogenesis	IEP	HCCA
BP	GO:0048829	root cap development	IEP	HCCA
BP	GO:0051781	positive regulation of cell division	IEP	HCCA
BP	GO:2000012	regulation of auxin polar transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	20	60

External Links

PLAZA 3.0 Dicots	AT3G47710

AT3G47710

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation