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  5. AT3G47760

AT3G47760


Description : ABC2 homolog 4


Gene families : OG_01_0000771 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000771_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G47760
Cluster HCCA: Cluster_369

Target Alias Description ECC score Gene Family Method Actions
AT3G47790 No alias ABC2 homolog 7 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c19_7970V3.1 No alias ABC2 homolog 7 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity ISS Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0009954 proximal/distal pattern formation IEP HCCA
BP GO:0010393 galacturonan metabolic process IEP HCCA
CC GO:0015935 small ribosomal subunit IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
CC GO:0022627 cytosolic small ribosomal subunit IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0034406 cell wall beta-glucan metabolic process IEP HCCA
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP HCCA
BP GO:0045488 pectin metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
BP GO:0048441 petal development IEP HCCA
MF GO:0050291 sphingosine N-acyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0052541 plant-type cell wall cellulose metabolic process IEP HCCA
BP GO:0052546 cell wall pectin metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 572 716
PLAZA 3.0 Dicots AT3G47760