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  5. AT3G47850

AT3G47850


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; Has 57 Blast hits to 57 proteins in 32 species: Archae - 0; Bacteria - 5; Metazoa - 12; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).


Gene families : OG_01_0016942 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G47850
Cluster HCCA: Cluster_253


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEP HCCA
MF GO:0000268 peroxisome targeting sequence binding IEP HCCA
CC GO:0000793 condensed chromosome IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005052 peroxisome matrix targeting signal-1 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006089 lactate metabolic process IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0008444 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity IEP HCCA
MF GO:0008901 ferredoxin hydrogenase activity IEP HCCA
BP GO:0009438 methylglyoxal metabolic process IEP HCCA
BP GO:0009608 response to symbiont IEP HCCA
BP GO:0009610 response to symbiotic fungus IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016695 oxidoreductase activity, acting on hydrogen as donor IEP HCCA
MF GO:0016699 oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016929 SUMO-specific protease activity IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
MF GO:0017169 CDP-alcohol phosphatidyltransferase activity IEP HCCA
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEP HCCA
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP HCCA
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP HCCA
CC GO:0031300 intrinsic component of organelle membrane IEP HCCA
CC GO:0031301 integral component of organelle membrane IEP HCCA
CC GO:0031306 intrinsic component of mitochondrial outer membrane IEP HCCA
CC GO:0031307 integral component of mitochondrial outer membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0032592 integral component of mitochondrial membrane IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042182 ketone catabolic process IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
CC GO:0042579 microbody IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044770 cell cycle phase transition IEP HCCA
BP GO:0044772 mitotic cell cycle phase transition IEP HCCA
BP GO:0044843 cell cycle G1/S phase transition IEP HCCA
BP GO:0045739 positive regulation of DNA repair IEP HCCA
BP GO:0046185 aldehyde catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051054 positive regulation of DNA metabolic process IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051596 methylglyoxal catabolic process IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
BP GO:0061727 methylglyoxal catabolic process to lactate IEP HCCA
CC GO:0098573 intrinsic component of mitochondrial membrane IEP HCCA
BP GO:1901332 negative regulation of lateral root development IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:2000023 regulation of lateral root development IEP HCCA
BP GO:2000069 regulation of post-embryonic root development IEP HCCA
BP GO:2000280 regulation of root development IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
BP GO:2001022 positive regulation of response to DNA damage stimulus IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT3G47850