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AT3G47860


Description : chloroplastic lipocalin


Gene families : OG_01_0010184 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G47860
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
Mp4g07530.1 No alias LCNP non-photochemical quenching regulator lipocalin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0006979 response to oxidative stress IMP Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0031977 thylakoid lumen IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process IEP HCCA
BP GO:0000025 maltose catabolic process IEP HCCA
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004133 glycogen debranching enzyme activity IEP HCCA
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005982 starch metabolic process IEP HCCA
BP GO:0005983 starch catabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006098 pentose-phosphate shunt IEP HCCA
BP GO:0006333 chromatin assembly or disassembly IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006740 NADPH regeneration IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007584 response to nutrient IEP HCCA
BP GO:0007623 circadian rhythm IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008320 protein transmembrane transporter activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009251 glucan catabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009313 oligosaccharide catabolic process IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009508 plastid chromosome IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010266 response to vitamin B1 IEP HCCA
MF GO:0010303 limit dextrinase activity IEP HCCA
MF GO:0015450 protein-transporting ATPase activity IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016045 detection of bacterium IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016143 S-glycoside metabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016781 phosphotransferase activity, paired acceptors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019144 ADP-sugar diphosphatase activity IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0019252 starch biosynthetic process IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0019757 glycosinolate metabolic process IEP HCCA
BP GO:0019760 glucosinolate metabolic process IEP HCCA
MF GO:0022884 macromolecule transmembrane transporter activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031300 intrinsic component of organelle membrane IEP HCCA
CC GO:0031301 integral component of organelle membrane IEP HCCA
CC GO:0031350 intrinsic component of plastid membrane IEP HCCA
CC GO:0031351 integral component of plastid membrane IEP HCCA
CC GO:0031352 intrinsic component of plastid inner membrane IEP HCCA
CC GO:0031353 integral component of plastid inner membrane IEP HCCA
CC GO:0031356 intrinsic component of chloroplast inner membrane IEP HCCA
CC GO:0031357 integral component of chloroplast inner membrane IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0032091 negative regulation of protein binding IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0033273 response to vitamin IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043393 regulation of protein binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044247 cellular polysaccharide catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046283 anthocyanin-containing compound metabolic process IEP HCCA
BP GO:0046352 disaccharide catabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0048511 rhythmic process IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
MF GO:0051060 pullulanase activity IEP HCCA
BP GO:0051098 regulation of binding IEP HCCA
BP GO:0051100 negative regulation of binding IEP HCCA
BP GO:0051156 glucose 6-phosphate metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0051752 phosphoglucan, water dikinase activity IEP HCCA
BP GO:0061077 chaperone-mediated protein folding IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070417 cellular response to cold IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0080041 ADP-ribose pyrophosphohydrolase activity IEP HCCA
BP GO:0098543 detection of other organism IEP HCCA
BP GO:0098581 detection of external biotic stimulus IEP HCCA
MF GO:0140318 protein transporter activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR000566 Lipocln_cytosolic_FA-bd_dom 137 297
PLAZA 3.0 Dicots AT3G47860