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  5. AT3G49000

AT3G49000


Description : RNA polymerase III subunit RPC82 family protein


Gene families : OG_01_0004999 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004999_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G49000
Cluster HCCA: Cluster_76


Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0001933 negative regulation of protein phosphorylation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004407 histone deacetylase activity IEP HCCA
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
MF GO:0005354 galactose transmembrane transporter activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006469 negative regulation of protein kinase activity IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008967 phosphoglycolate phosphatase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 posttranscriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015149 hexose transmembrane transporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016441 posttranscriptional gene silencing IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0031048 heterochromatin assembly by small RNA IEP HCCA
BP GO:0031507 heterochromatin assembly IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0033558 protein deacetylase activity IEP HCCA
BP GO:0033673 negative regulation of kinase activity IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
BP GO:0040029 regulation of gene expression, epigenetic IEP HCCA
BP GO:0042326 negative regulation of phosphorylation IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051348 negative regulation of transferase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0071901 negative regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1990069 stomatal opening IEP HCCA
BP GO:2000070 regulation of response to water deprivation IEP HCCA
InterPro domains Description Start Stop
IPR008806 RNA_pol_III_Rpc82_C 151 363
IPR013197 RNA_pol_III_RPC82-rel_HTH 11 70
PLAZA 3.0 Dicots AT3G49000