- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
No description available
Gene families : OG_01_0000027 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000027_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G49045 | |
| Cluster | HCCA: Cluster_112 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G05080 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G22000 | No alias | FBD, F-box and Leucine Rich Repeat domains containing protein | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G32375 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G47695 | No alias | No description available | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G50980 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G55030 | No alias | RNI-like superfamily protein | 0.08 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G10750 | No alias | FBD domain family | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G12840 | No alias | unknown protein; Has 0 Blast hits to 0 proteins in 0... | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G26930 | No alias | Protein with RNI-like/FBD-like domains | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G49020 | No alias | FBD, F-box and Leucine Rich Repeat domains containing protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G49030 | No alias | FBD, F-box and Leucine Rich Repeat domains containing protein | 0.08 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G49480 | No alias | Protein with RNI-like/FBD-like domains | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G52690 | No alias | RNI-like superfamily protein | 0.09 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT4G00160 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT4G10410 | No alias | Leucine-rich repeat (LRR) family protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT4G13965 | No alias | Protein with RNI-like/FBD-like domains | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT4G26340 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT4G26350 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.09 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G38565 | No alias | F-box/FBD-like domains containing protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G38570 | No alias | F-box/RNI-like superfamily protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G38590 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G40750 | No alias | FBD / Leucine Rich Repeat domains containing protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G44850 | No alias | Protein with RNI-like/FBD-like domains | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G52460 | No alias | FBD, F-box and Leucine Rich Repeat domains containing protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G56325 | No alias | FBD-like domain family protein | 0.08 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G56370 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G56390 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G56400 | No alias | FBD, F-box, Skp2-like and Leucine Rich Repeat domains... | 0.09 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G56410 | No alias | Protein with RNI-like/FBD-like domains | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G56420 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G56430 | No alias | F-box/FBD-like domains containing protein | 0.09 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G56452 | No alias | FBD-like domain family protein | 0.09 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G56560 | No alias | FBD, F-box and Leucine Rich Repeat domains containing protein | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G56570 | No alias | Leucine-rich repeat (LRR) family protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G56810 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G56820 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G60610 | No alias | F-box/RNI-like superfamily protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G62970 | No alias | Protein with RNI-like/FBD-like domains | 0.08 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000311 | plastid large ribosomal subunit | IEP | HCCA |
| MF | GO:0003883 | CTP synthase activity | IEP | HCCA |
| MF | GO:0004525 | ribonuclease III activity | IEP | HCCA |
| MF | GO:0004673 | protein histidine kinase activity | IEP | HCCA |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | HCCA |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | HCCA |
| MF | GO:0046910 | pectinesterase inhibitor activity | IEP | HCCA |
| BP | GO:0080117 | secondary growth | IEP | HCCA |
| BP | GO:0080190 | lateral growth | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT3G49045 |