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AT3G49710


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0018163 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G49710
Cluster HCCA: Cluster_51


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000182 rDNA binding IEP HCCA
BP GO:0000373 Group II intron splicing IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004300 enoyl-CoA hydratase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004564 beta-fructofuranosidase activity IEP HCCA
MF GO:0004575 sucrose alpha-glucosidase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005987 sucrose catabolic process IEP HCCA
MF GO:0008419 RNA lariat debranching enzyme activity IEP HCCA
BP GO:0008535 respiratory chain complex IV assembly IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009313 oligosaccharide catabolic process IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009649 entrainment of circadian clock IEP HCCA
MF GO:0009824 AMP dimethylallyltransferase activity IEP HCCA
MF GO:0015203 polyamine transmembrane transporter activity IEP HCCA
BP GO:0015846 polyamine transport IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0043153 entrainment of circadian clock by photoperiod IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0046352 disaccharide catabolic process IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
MF GO:0052381 tRNA dimethylallyltransferase activity IEP HCCA
MF GO:0090599 alpha-glucosidase activity IEP HCCA
BP GO:0097031 obsolete mitochondrial respiratory chain complex I biogenesis IEP HCCA
BP GO:0097034 obsolete mitochondrial respiratory chain complex IV biogenesis IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 584 711
IPR002885 Pentatricopeptide_repeat 411 458
IPR002885 Pentatricopeptide_repeat 307 355
IPR002885 Pentatricopeptide_repeat 204 250
IPR002885 Pentatricopeptide_repeat 103 152
IPR002885 Pentatricopeptide_repeat 485 509
IPR002885 Pentatricopeptide_repeat 75 100
IPR002885 Pentatricopeptide_repeat 385 410
IPR002885 Pentatricopeptide_repeat 177 201
PLAZA 3.0 Dicots AT3G49710