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AT3G52680


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG_01_0000027 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G52680
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G32375 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38590 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009432 SOS response IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016925 protein sumoylation IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
MF GO:0019789 SUMO transferase activity IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
BP GO:0032875 regulation of DNA endoreduplication IEP HCCA
BP GO:0032876 negative regulation of DNA endoreduplication IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0045036 protein targeting to chloroplast IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0045931 positive regulation of mitotic cell cycle IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0060249 anatomical structure homeostasis IEP HCCA
BP GO:0060250 germ-line stem-cell niche homeostasis IEP HCCA
BP GO:0072596 establishment of protein localization to chloroplast IEP HCCA
BP GO:0072598 protein localization to chloroplast IEP HCCA
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP HCCA
BP GO:0080038 positive regulation of cytokinin-activated signaling pathway IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
BP GO:0090329 regulation of DNA-dependent DNA replication IEP HCCA
BP GO:0098754 detoxification IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR006566 FBD 362 407
IPR001810 F-box_dom 22 59
IPR013101 Leu-rich_rpt_2 171 196
PLAZA 3.0 Dicots AT3G52680