AT3G53200

Description : myb domain protein 27

Gene families : OG_01_0000592 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G53200
Cluster	HCCA: Cluster_113

Target	Alias	Description	ECC score	Gene Family Method
AT1G25340	No alias	myb domain protein 116	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G68320	No alias	myb domain protein 62	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G27810	No alias	myb domain protein 21	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G40350	No alias	myb domain protein 24	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010200	response to chitin	IEP	Interproscan
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	HCCA
BP	GO:0002832	negative regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0004723	calcium-dependent protein serine/threonine phosphatase activity	IEP	HCCA
MF	GO:0004792	thiosulfate sulfurtransferase activity	IEP	HCCA
MF	GO:0004860	protein kinase inhibitor activity	IEP	HCCA
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	HCCA
MF	GO:0005496	steroid binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0006534	cysteine metabolic process	IEP	HCCA
BP	GO:0006649	phospholipid transfer to membrane	IEP	HCCA
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
BP	GO:0007043	cell-cell junction assembly	IEP	HCCA
BP	GO:0007088	regulation of mitotic nuclear division	IEP	HCCA
MF	GO:0008142	oxysterol binding	IEP	HCCA
BP	GO:0008154	actin polymerization or depolymerization	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
MF	GO:0008327	methyl-CpG binding	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009639	response to red or far red light	IEP	HCCA
BP	GO:0009641	shade avoidance	IEP	HCCA
BP	GO:0009704	de-etiolation	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009720	detection of hormone stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009726	detection of endogenous stimulus	IEP	HCCA
BP	GO:0009727	detection of ethylene stimulus	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009746	response to hexose	IEP	HCCA
BP	GO:0009750	response to fructose	IEP	HCCA
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEP	HCCA
BP	GO:0009896	positive regulation of catabolic process	IEP	HCCA
BP	GO:0009914	hormone transport	IEP	HCCA
BP	GO:0009926	auxin polar transport	IEP	HCCA
BP	GO:0010017	red or far-red light signaling pathway	IEP	HCCA
BP	GO:0010030	positive regulation of seed germination	IEP	HCCA
MF	GO:0010296	prenylcysteine methylesterase activity	IEP	HCCA
BP	GO:0010345	suberin biosynthetic process	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
BP	GO:0010500	transmitting tissue development	IEP	HCCA
BP	GO:0010817	regulation of hormone levels	IEP	HCCA
BP	GO:0015914	phospholipid transport	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016630	protochlorophyllide reductase activity	IEP	HCCA
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	HCCA
MF	GO:0016783	sulfurtransferase activity	IEP	HCCA
MF	GO:0016847	1-aminocyclopropane-1-carboxylate synthase activity	IEP	HCCA
MF	GO:0019210	kinase inhibitor activity	IEP	HCCA
BP	GO:0019344	cysteine biosynthetic process	IEP	HCCA
BP	GO:0030041	actin filament polymerization	IEP	HCCA
BP	GO:0030104	water homeostasis	IEP	HCCA
BP	GO:0030162	regulation of proteolysis	IEP	HCCA
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	HCCA
BP	GO:0030497	fatty acid elongation	IEP	HCCA
CC	GO:0031225	anchored component of membrane	IEP	HCCA
BP	GO:0031331	positive regulation of cellular catabolic process	IEP	HCCA
BP	GO:0031539	positive regulation of anthocyanin metabolic process	IEP	HCCA
BP	GO:0032102	negative regulation of response to external stimulus	IEP	HCCA
BP	GO:0032434	regulation of proteasomal ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	IEP	HCCA
MF	GO:0032934	sterol binding	IEP	HCCA
BP	GO:0034284	response to monosaccharide	IEP	HCCA
BP	GO:0034329	cell junction assembly	IEP	HCCA
BP	GO:0034330	cell junction organization	IEP	HCCA
BP	GO:0042176	regulation of protein catabolic process	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
CC	GO:0043674	columella	IEP	HCCA
BP	GO:0045216	cell-cell junction organization	IEP	HCCA
BP	GO:0045454	cell redox homeostasis	IEP	HCCA
BP	GO:0045732	positive regulation of protein catabolic process	IEP	HCCA
BP	GO:0045839	negative regulation of mitotic nuclear division	IEP	HCCA
BP	GO:0045862	positive regulation of proteolysis	IEP	HCCA
BP	GO:0045927	positive regulation of growth	IEP	HCCA
BP	GO:0045930	negative regulation of mitotic cell cycle	IEP	HCCA
BP	GO:0046620	regulation of organ growth	IEP	HCCA
BP	GO:0046622	positive regulation of organ growth	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
CC	GO:0048226	Casparian strip	IEP	HCCA
BP	GO:0048366	leaf development	IEP	HCCA
BP	GO:0048438	floral whorl development	IEP	HCCA
BP	GO:0048462	carpel formation	IEP	HCCA
BP	GO:0048467	gynoecium development	IEP	HCCA
BP	GO:0048639	positive regulation of developmental growth	IEP	HCCA
BP	GO:0048825	cotyledon development	IEP	HCCA
MF	GO:0050062	long-chain-fatty-acyl-CoA reductase activity	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
MF	GO:0051723	protein methylesterase activity	IEP	HCCA
BP	GO:0051783	regulation of nuclear division	IEP	HCCA
BP	GO:0051784	negative regulation of nuclear division	IEP	HCCA
BP	GO:0060918	auxin transport	IEP	HCCA
BP	GO:0061136	regulation of proteasomal protein catabolic process	IEP	HCCA
BP	GO:0065008	regulation of biological quality	IEP	HCCA
BP	GO:0071398	cellular response to fatty acid	IEP	HCCA
BP	GO:0071478	cellular response to radiation	IEP	HCCA
BP	GO:0071482	cellular response to light stimulus	IEP	HCCA
BP	GO:0071489	cellular response to red or far red light	IEP	HCCA
MF	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity	IEP	HCCA
BP	GO:0080126	ovary septum development	IEP	HCCA
BP	GO:0080167	response to karrikin	IEP	HCCA
BP	GO:0080170	hydrogen peroxide transmembrane transport	IEP	HCCA
BP	GO:1900424	regulation of defense response to bacterium	IEP	HCCA
BP	GO:1900425	negative regulation of defense response to bacterium	IEP	HCCA
BP	GO:1901483	regulation of transcription factor catabolic process	IEP	HCCA
BP	GO:1901485	positive regulation of transcription factor catabolic process	IEP	HCCA
BP	GO:1901800	positive regulation of proteasomal protein catabolic process	IEP	HCCA
BP	GO:1903050	regulation of proteolysis involved in cellular protein catabolic process	IEP	HCCA
BP	GO:1903052	positive regulation of proteolysis involved in cellular protein catabolic process	IEP	HCCA
BP	GO:1903362	regulation of cellular protein catabolic process	IEP	HCCA
BP	GO:1903364	positive regulation of cellular protein catabolic process	IEP	HCCA
BP	GO:1905328	plant septum development	IEP	HCCA
BP	GO:2000058	regulation of ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:2000060	positive regulation of ubiquitin-dependent protein catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	11	58
IPR001005	SANT/Myb	64	108

External Links

PLAZA 3.0 Dicots	AT3G53200

AT3G53200

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation