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AT3G53270


Description : Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein


Gene families : OG_01_0006865 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G53270
Cluster HCCA: Cluster_22


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000164 protein phosphatase type 1 complex IEP HCCA
BP GO:0000578 embryonic axis specification IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003691 double-stranded telomeric DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0004930 G protein-coupled receptor activity IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
MF GO:0008020 G protein-coupled photoreceptor activity IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP HCCA
BP GO:0009301 snRNA transcription IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009798 axis specification IEP HCCA
MF GO:0009881 photoreceptor activity IEP HCCA
MF GO:0009883 red or far-red light photoreceptor activity IEP HCCA
BP GO:0009942 longitudinal axis specification IEP HCCA
BP GO:0009945 radial axis specification IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0016036 cellular response to phosphate starvation IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016578 histone deubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016621 cinnamoyl-CoA reductase activity IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
MF GO:0031491 nucleosome binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035250 UDP-galactosyltransferase activity IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043696 dedifferentiation IEP HCCA
BP GO:0043697 cell dedifferentiation IEP HCCA
MF GO:0046481 digalactosyldiacylglycerol synthase activity IEP HCCA
BP GO:0060184 cell cycle switching IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071365 cellular response to auxin stimulus IEP HCCA
BP GO:0071368 cellular response to cytokinin stimulus IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:0098781 ncRNA transcription IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR019188 SNAPc_SNAP43 6 199
PLAZA 3.0 Dicots AT3G53270