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  5. AT1G15730

AT1G15730


Description : Cobalamin biosynthesis CobW-like protein


Gene families : OG_01_0002174 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G15730
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
Mp1g05690.1 No alias TAC17 cofactor of plastid-encoded RNA polymerase 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_23140V3.1 No alias plastid transcriptionally active 17 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process IEP HCCA
MF GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity IEP HCCA
MF GO:0004040 amidase activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
BP GO:0005982 starch metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid family metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0009668 plastid membrane organization IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
MF GO:0009881 photoreceptor activity IEP HCCA
MF GO:0009882 blue light photoreceptor activity IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009902 chloroplast relocation IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010027 thylakoid membrane organization IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0010343 singlet oxygen-mediated programmed cell death IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010617 circadian regulation of calcium ion oscillation IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016657 oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019252 starch biosynthetic process IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0019750 chloroplast localization IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of ion transmembrane transport IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0036473 cell death in response to oxidative stress IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
MF GO:0042171 lysophosphatidic acid acyltransferase activity IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
BP GO:0042793 plastid transcription IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043269 regulation of ion transport IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
MF GO:0043864 indoleacetamide hydrolase activity IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0045038 protein import into chloroplast thylakoid membrane IEP HCCA
MF GO:0045309 protein phosphorylated amino acid binding IEP HCCA
BP GO:0045893 positive regulation of transcription, DNA-templated IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048564 photosystem I assembly IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
MF GO:0051219 phosphoprotein binding IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051480 regulation of cytosolic calcium ion concentration IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051644 plastid localization IEP HCCA
BP GO:0051656 establishment of organelle localization IEP HCCA
BP GO:0051667 establishment of plastid localization IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071483 cellular response to blue light IEP HCCA
MF GO:0071617 lysophospholipid acyltransferase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090342 regulation of cell aging IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1904062 regulation of cation transmembrane transport IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR003495 CobW/HypB/UreG_dom 93 277
IPR011629 Cbl_biosynth_CobW-like_C 354 447
PLAZA 3.0 Dicots AT1G15730