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  5. AT3G53830

AT3G53830


Description : Regulator of chromosome condensation (RCC1) family protein


Gene families : OG_01_0002760 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002760_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G53830
Cluster HCCA: Cluster_263


Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding ISS Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003727 single-stranded RNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity IEP HCCA
MF GO:0004364 glutathione transferase activity IEP HCCA
MF GO:0004396 hexokinase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009694 jasmonic acid metabolic process IEP HCCA
BP GO:0010288 response to lead ion IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019003 GDP binding IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
CC GO:0031300 intrinsic component of organelle membrane IEP HCCA
CC GO:0031301 integral component of organelle membrane IEP HCCA
CC GO:0031306 intrinsic component of mitochondrial outer membrane IEP HCCA
CC GO:0031307 integral component of mitochondrial outer membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
CC GO:0032592 integral component of mitochondrial membrane IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043295 glutathione binding IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098573 intrinsic component of mitochondrial membrane IEP HCCA
MF GO:1900750 oligopeptide binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 419 467
IPR000408 Reg_chr_condens 233 310
IPR000408 Reg_chr_condens 365 416
IPR000408 Reg_chr_condens 314 362
PLAZA 3.0 Dicots AT3G53830