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  5. AT3G54590

AT3G54590


Description : hydroxyproline-rich glycoprotein


Gene families : OG_01_0008005 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G54590
Cluster HCCA: Cluster_93


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005385 zinc ion transmembrane transporter activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006820 anion transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006829 zinc ion transport IEP HCCA
BP GO:0007154 cell communication IEP HCCA
MF GO:0008446 GDP-mannose 4,6-dehydratase activity IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
MF GO:0009927 histidine phosphotransfer kinase activity IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010054 trichoblast differentiation IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
BP GO:0010466 negative regulation of peptidase activity IEP HCCA
BP GO:0010951 negative regulation of endopeptidase activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transport IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0030162 regulation of proteolysis IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0045861 negative regulation of proteolysis IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
BP GO:0048468 cell development IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0048829 root cap development IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
BP GO:0052547 regulation of peptidase activity IEP HCCA
BP GO:0052548 regulation of endopeptidase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055062 phosphate ion homeostasis IEP HCCA
BP GO:0055081 anion homeostasis IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071365 cellular response to auxin stimulus IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0072506 trivalent inorganic anion homeostasis IEP HCCA
BP GO:0072732 cellular response to calcium ion starvation IEP HCCA
BP GO:0080147 root hair cell development IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
InterPro domains Description Start Stop
IPR006706 Extensin_dom 556 605
IPR006706 Extensin_dom 181 230
IPR006706 Extensin_dom 59 105
IPR006706 Extensin_dom 306 355
IPR006706 Extensin_dom 256 305
IPR006706 Extensin_dom 356 405
IPR006706 Extensin_dom 131 180
IPR006706 Extensin_dom 81 130
IPR006706 Extensin_dom 281 330
IPR006706 Extensin_dom 381 430
IPR006706 Extensin_dom 156 205
IPR006706 Extensin_dom 106 155
IPR006706 Extensin_dom 456 505
IPR006706 Extensin_dom 531 580
IPR006706 Extensin_dom 481 530
IPR006706 Extensin_dom 431 480
IPR006706 Extensin_dom 331 380
IPR006706 Extensin_dom 406 455
IPR006706 Extensin_dom 506 555
IPR006706 Extensin_dom 231 280
IPR006706 Extensin_dom 206 255
PLAZA 3.0 Dicots AT3G54590