AT3G54820

Description : plasma membrane intrinsic protein 2;5

Gene families : OG_01_0000063 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G54820
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
Mp1g04190.1	No alias	tonoplast intrinsic protein (TIP)	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g04200.1	No alias	tonoplast intrinsic protein (TIP)	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g11720.1	No alias	tonoplast intrinsic protein (TIP)	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g11730.1	No alias	tonoplast intrinsic protein (TIP)	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g11740.1	No alias	tonoplast intrinsic protein (TIP)	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g11750.1	No alias	tonoplast intrinsic protein (TIP)	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g11790.1	No alias	tonoplast intrinsic protein (TIP)	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c23_15870V3.1	No alias	tonoplast intrinsic protein 1;3	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005372	water transmembrane transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006810	transport	ISS	Interproscan
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006826	iron ion transport	RCA	Interproscan
BP	GO:0006833	water transport	IMP	Interproscan
BP	GO:0006833	water transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010106	cellular response to iron ion starvation	RCA	Interproscan
MF	GO:0015250	water channel activity	ISS	Interproscan
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	ISS	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042044	fluid transport	None	Extended
BP	GO:0042594	response to starvation	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000003	reproduction	IEP	HCCA
BP	GO:0000723	telomere maintenance	IEP	HCCA
BP	GO:0003002	regionalization	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0007020	microtubule nucleation	IEP	HCCA
BP	GO:0007129	homologous chromosome pairing at meiosis	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009690	cytokinin metabolic process	IEP	HCCA
BP	GO:0009691	cytokinin biosynthetic process	IEP	HCCA
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0009739	response to gibberellin	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	HCCA
BP	GO:0009887	animal organ morphogenesis	IEP	HCCA
BP	GO:0009934	regulation of meristem structural organization	IEP	HCCA
BP	GO:0010016	shoot system morphogenesis	IEP	HCCA
BP	GO:0010051	xylem and phloem pattern formation	IEP	HCCA
BP	GO:0010093	specification of floral organ identity	IEP	HCCA
BP	GO:0010094	specification of carpel identity	IEP	HCCA
BP	GO:0010212	response to ionizing radiation	IEP	HCCA
BP	GO:0010332	response to gamma radiation	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
MF	GO:0016289	CoA hydrolase activity	IEP	HCCA
MF	GO:0016790	thiolester hydrolase activity	IEP	HCCA
BP	GO:0019827	stem cell population maintenance	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0032200	telomere organization	IEP	HCCA
BP	GO:0032204	regulation of telomere maintenance	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0032504	multicellular organism reproduction	IEP	HCCA
BP	GO:0042138	meiotic DNA double-strand break formation	IEP	HCCA
BP	GO:0043247	telomere maintenance in response to DNA damage	IEP	HCCA
BP	GO:0045132	meiotic chromosome segregation	IEP	HCCA
MF	GO:0046982	protein heterodimerization activity	IEP	HCCA
MF	GO:0047617	acyl-CoA hydrolase activity	IEP	HCCA
BP	GO:0048438	floral whorl development	IEP	HCCA
BP	GO:0048439	flower morphogenesis	IEP	HCCA
BP	GO:0048440	carpel development	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048446	petal morphogenesis	IEP	HCCA
BP	GO:0048467	gynoecium development	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048513	animal organ development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0061982	meiosis I cell cycle process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	IEP	HCCA
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
BP	GO:0090701	specification of plant organ identity	IEP	HCCA
BP	GO:0098727	maintenance of cell number	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000425	MIP	31	265

External Links

PLAZA 3.0 Dicots	AT3G54820

AT3G54820

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation