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AT3G54910


Description : RNI-like superfamily protein


Gene families : OG_01_0000027 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G54910
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
AT5G38570 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000064 L-ornithine transmembrane transporter activity IEP HCCA
MF GO:0003941 L-serine ammonia-lyase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
MF GO:0005253 anion channel activity IEP HCCA
MF GO:0005290 L-histidine transmembrane transporter activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
BP GO:0006360 transcription by RNA polymerase I IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
MF GO:0008308 voltage-gated anion channel activity IEP HCCA
MF GO:0008509 anion transmembrane transporter activity IEP HCCA
MF GO:0008721 D-serine ammonia-lyase activity IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
MF GO:0015173 aromatic amino acid transmembrane transporter activity IEP HCCA
MF GO:0015174 basic amino acid transmembrane transporter activity IEP HCCA
MF GO:0015179 L-amino acid transmembrane transporter activity IEP HCCA
MF GO:0015189 L-lysine transmembrane transporter activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016841 ammonia-lyase activity IEP HCCA
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0030378 serine racemase activity IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP HCCA
BP GO:0042780 tRNA 3'-end processing IEP HCCA
MF GO:0042781 3'-tRNA processing endoribonuclease activity IEP HCCA
BP GO:0043628 ncRNA 3'-end processing IEP HCCA
BP GO:0046416 D-amino acid metabolic process IEP HCCA
MF GO:0047661 amino-acid racemase activity IEP HCCA
BP GO:0070178 D-serine metabolic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:1901474 azole transmembrane transporter activity IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 112 137
IPR006566 FBD 297 342
PLAZA 3.0 Dicots AT3G54910