AT3G55070


Description : LisH/CRA/RING-U-box domains-containing protein


Gene families : OG_01_0005185 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005185_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G55070
Cluster HCCA: Cluster_79


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
BP GO:0000082 G1/S transition of mitotic cell cycle IEP HCCA
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0000164 protein phosphatase type 1 complex IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
MF GO:0004737 pyruvate decarboxylase activity IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006651 diacylglycerol biosynthetic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
MF GO:0008195 phosphatidate phosphatase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0009514 glyoxysome IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
MF GO:0010283 pinoresinol reductase activity IEP HCCA
BP GO:0010288 response to lead ion IEP HCCA
MF GO:0015099 nickel cation transmembrane transporter activity IEP HCCA
MF GO:0015203 polyamine transmembrane transporter activity IEP HCCA
BP GO:0015675 nickel cation transport IEP HCCA
BP GO:0015846 polyamine transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016657 oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016929 SUMO-specific protease activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP HCCA
BP GO:0031425 chloroplast RNA processing IEP HCCA
MF GO:0032791 lead ion binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0044770 cell cycle phase transition IEP HCCA
BP GO:0044772 mitotic cell cycle phase transition IEP HCCA
BP GO:0044843 cell cycle G1/S phase transition IEP HCCA
BP GO:0045962 positive regulation of development, heterochronic IEP HCCA
BP GO:0046339 diacylglycerol metabolic process IEP HCCA
BP GO:0046460 neutral lipid biosynthetic process IEP HCCA
BP GO:0046463 acylglycerol biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048530 fruit morphogenesis IEP HCCA
BP GO:0090435 protein localization to nuclear envelope IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
BP GO:1900150 regulation of defense response to fungus IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR024964 CTLH/CRA 180 324
PLAZA 3.0 Dicots AT3G55070