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  5. AT3G55500

AT3G55500


Description : expansin A16


Gene families : OG_01_0000011 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G55500

Target Alias Description ECC score Gene Family Method Actions
AT1G20190 No alias expansin 11 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G28950 No alias expansin A6 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G03220 No alias expansin A13 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_15911.1 No alias alpha-class expansin 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0006949 syncytium formation IEP Interproscan
BP GO:0009826 unidimensional cell growth ISS Interproscan
BP GO:0009826 unidimensional cell growth NAS Interproscan
BP GO:0009828 plant-type cell wall loosening ISS Interproscan
BP GO:0009828 plant-type cell wall loosening NAS Interproscan
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0007568 aging IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009735 response to cytokinin IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0010017 red or far-red light signaling pathway IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0018685 alkane 1-monooxygenase activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031647 regulation of protein stability IEP HCCA
BP GO:0032268 regulation of cellular protein metabolic process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0042538 hyperosmotic salinity response IEP HCCA
BP GO:0050821 protein stabilization IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0061687 detoxification of inorganic compound IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071489 cellular response to red or far red light IEP HCCA
BP GO:0071585 detoxification of cadmium ion IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:0098754 detoxification IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 167 244
IPR009009 RlpA-like_DPBB 69 156
PLAZA 3.0 Dicots AT3G55500