AT3G56960

Description : phosphatidyl inositol monophosphate 5 kinase 4

Gene families : OG_01_0000680 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000680_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G56960
Cluster	HCCA: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT3G09920	No alias	phosphatidyl inositol monophosphate 5 kinase	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006650	glycerophospholipid metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006897	endocytosis	IMP	Interproscan
BP	GO:0007164	establishment of tissue polarity	IMP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009827	plant-type cell wall modification	IMP	Interproscan
BP	GO:0009827	plant-type cell wall modification	RCA	Interproscan
BP	GO:0009846	pollen germination	IGI	Interproscan
BP	GO:0009860	pollen tube growth	IMP	Interproscan
BP	GO:0009860	pollen tube growth	IGI	Interproscan
BP	GO:0009860	pollen tube growth	RCA	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010118	stomatal movement	IMP	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	None	Extended
MF	GO:0016308	1-phosphatidylinositol-4-phosphate 5-kinase activity	IDA	Interproscan
MF	GO:0016308	1-phosphatidylinositol-4-phosphate 5-kinase activity	ISS	Interproscan
CC	GO:0016324	apical plasma membrane	IDA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
CC	GO:0042995	cell projection	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0046486	glycerolipid metabolic process	None	Extended
BP	GO:0046488	phosphatidylinositol metabolic process	IDA	Interproscan
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0090406	pollen tube	IDA	Interproscan
CC	GO:0098590	plasma membrane region	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	HCCA
BP	GO:0001558	regulation of cell growth	IEP	HCCA
BP	GO:0001708	cell fate specification	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	HCCA
MF	GO:0005451	monovalent cation:proton antiporter activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
CC	GO:0005938	cell cortex	IEP	HCCA
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	HCCA
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	HCCA
BP	GO:0006814	sodium ion transport	IEP	HCCA
BP	GO:0006928	movement of cell or subcellular component	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
BP	GO:0009556	microsporogenesis	IEP	HCCA
BP	GO:0009865	pollen tube adhesion	IEP	HCCA
BP	GO:0009957	epidermal cell fate specification	IEP	HCCA
BP	GO:0009968	negative regulation of signal transduction	IEP	HCCA
BP	GO:0010191	mucilage metabolic process	IEP	HCCA
BP	GO:0010192	mucilage biosynthetic process	IEP	HCCA
BP	GO:0010208	pollen wall assembly	IEP	HCCA
BP	GO:0010214	seed coat development	IEP	HCCA
BP	GO:0010584	pollen exine formation	IEP	HCCA
BP	GO:0010648	negative regulation of cell communication	IEP	HCCA
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	HCCA
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	HCCA
MF	GO:0015081	sodium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015298	solute:cation antiporter activity	IEP	HCCA
MF	GO:0015299	solute:proton antiporter activity	IEP	HCCA
MF	GO:0015385	sodium:proton antiporter activity	IEP	HCCA
MF	GO:0015491	cation:cation antiporter activity	IEP	HCCA
MF	GO:0016175	superoxide-generating NAD(P)H oxidase activity	IEP	HCCA
CC	GO:0016459	myosin complex	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	HCCA
BP	GO:0022604	regulation of cell morphogenesis	IEP	HCCA
BP	GO:0022610	biological adhesion	IEP	HCCA
BP	GO:0023057	negative regulation of signaling	IEP	HCCA
BP	GO:0030029	actin filament-based process	IEP	HCCA
BP	GO:0030048	actin filament-based movement	IEP	HCCA
CC	GO:0030133	transport vesicle	IEP	HCCA
CC	GO:0030427	site of polarized growth	IEP	HCCA
BP	GO:0034220	ion transmembrane transport	IEP	HCCA
BP	GO:0034293	sexual sporulation	IEP	HCCA
BP	GO:0035023	regulation of Rho protein signal transduction	IEP	HCCA
BP	GO:0035024	negative regulation of Rho protein signal transduction	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
BP	GO:0035725	sodium ion transmembrane transport	IEP	HCCA
CC	GO:0035838	growing cell tip	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0043934	sporulation	IEP	HCCA
CC	GO:0045177	apical part of cell	IEP	HCCA
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	HCCA
BP	GO:0046580	negative regulation of Ras protein signal transduction	IEP	HCCA
BP	GO:0048236	plant-type sporogenesis	IEP	HCCA
BP	GO:0048354	mucilage biosynthetic process involved in seed coat development	IEP	HCCA
BP	GO:0048359	mucilage metabolic process involved in seed coat development	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0048868	pollen tube development	IEP	HCCA
BP	GO:0048869	cellular developmental process	IEP	HCCA
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	HCCA
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0051058	negative regulation of small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
MF	GO:0051139	metal ion:proton antiporter activity	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
CC	GO:0051286	cell tip	IEP	HCCA
BP	GO:0051321	meiotic cell cycle	IEP	HCCA
BP	GO:0051510	regulation of unidimensional cell growth	IEP	HCCA
BP	GO:0051645	Golgi localization	IEP	HCCA
BP	GO:0051646	mitochondrion localization	IEP	HCCA
BP	GO:0051703	biological process involved in intraspecies interaction between organisms	IEP	HCCA
BP	GO:0060151	peroxisome localization	IEP	HCCA
CC	GO:0060187	cell pole	IEP	HCCA
CC	GO:0070382	exocytic vesicle	IEP	HCCA
BP	GO:0080092	regulation of pollen tube growth	IEP	HCCA
CC	GO:0090404	pollen tube tip	IEP	HCCA
BP	GO:0098609	cell-cell adhesion	IEP	HCCA
BP	GO:0098655	cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
CC	GO:0099503	secretory vesicle	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA
BP	GO:1902532	negative regulation of intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003409	MORN	123	145
IPR003409	MORN	100	121
IPR003409	MORN	215	236
IPR003409	MORN	77	99
IPR003409	MORN	192	214
IPR003409	MORN	169	190
IPR003409	MORN	238	258
IPR003409	MORN	146	168
IPR002498	PInositol-4-P-5-kinase_core	477	773

External Links

PLAZA 3.0 Dicots	AT3G56960

AT3G56960

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation