1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G57590

AT3G57590


Description : F-box and associated interaction domains-containing protein


Gene families : OG_01_0000008 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G57590
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53360 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G40910 No alias F-box and associated interaction domains-containing protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G57580 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G15660 No alias F-box and associated interaction domains-containing protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G50220 No alias F-box family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
BP GO:0000302 response to reactive oxygen species IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0000781 chromosome, telomeric region IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
MF GO:0003879 ATP phosphoribosyltransferase activity IEP HCCA
MF GO:0003958 NADPH-hemoprotein reductase activity IEP HCCA
MF GO:0004300 enoyl-CoA hydratase activity IEP HCCA
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP HCCA
MF GO:0004372 glycine hydroxymethyltransferase activity IEP HCCA
MF GO:0004430 1-phosphatidylinositol 4-kinase activity IEP HCCA
MF GO:0004864 protein phosphatase inhibitor activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005457 GDP-fucose transmembrane transporter activity IEP HCCA
MF GO:0005459 UDP-galactose transmembrane transporter activity IEP HCCA
MF GO:0005460 UDP-glucose transmembrane transporter activity IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006491 N-glycan processing IEP HCCA
BP GO:0006493 protein O-linked glycosylation IEP HCCA
BP GO:0006517 protein deglycosylation IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006567 threonine catabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008142 oxysterol binding IEP HCCA
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP HCCA
BP GO:0009100 glycoprotein metabolic process IEP HCCA
CC GO:0009331 glycerol-3-phosphate dehydrogenase complex IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009704 de-etiolation IEP HCCA
MF GO:0009824 AMP dimethylallyltransferase activity IEP HCCA
BP GO:0009868 jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway IEP HCCA
CC GO:0009897 external side of plasma membrane IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0010959 regulation of metal ion transport IEP HCCA
MF GO:0015105 arsenite transmembrane transporter activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015700 arsenite transport IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015783 GDP-fucose transmembrane transport IEP HCCA
BP GO:0015786 UDP-glucose transmembrane transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016208 AMP binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016508 long-chain-enoyl-CoA hydratase activity IEP HCCA
MF GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019212 phosphatase inhibitor activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
CC GO:0030054 cell junction IEP HCCA
CC GO:0031306 intrinsic component of mitochondrial outer membrane IEP HCCA
CC GO:0031307 integral component of mitochondrial outer membrane IEP HCCA
CC GO:0032592 integral component of mitochondrial membrane IEP HCCA
MF GO:0032934 sterol binding IEP HCCA
BP GO:0033609 oxalate metabolic process IEP HCCA
BP GO:0033611 oxalate catabolic process IEP HCCA
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP HCCA
MF GO:0036080 purine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
BP GO:0043132 NAD transport IEP HCCA
BP GO:0043270 positive regulation of ion transport IEP HCCA
BP GO:0043434 response to peptide hormone IEP HCCA
BP GO:0043649 dicarboxylic acid catabolic process IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046482 para-aminobenzoic acid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046854 phosphatidylinositol phosphate biosynthetic process IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0048358 mucilage pectin biosynthetic process IEP HCCA
BP GO:0048363 mucilage pectin metabolic process IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0050203 oxalate-CoA ligase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051050 positive regulation of transport IEP HCCA
MF GO:0051724 NAD transmembrane transporter activity IEP HCCA
BP GO:0051924 regulation of calcium ion transport IEP HCCA
BP GO:0051928 positive regulation of calcium ion transport IEP HCCA
MF GO:0052622 ATP dimethylallyltransferase activity IEP HCCA
MF GO:0052623 ADP dimethylallyltransferase activity IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
MF GO:0052742 phosphatidylinositol kinase activity IEP HCCA
BP GO:0060416 response to growth hormone IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071216 cellular response to biotic stimulus IEP HCCA
BP GO:0071219 cellular response to molecule of bacterial origin IEP HCCA
BP GO:0071323 cellular response to chitin IEP HCCA
BP GO:0071417 cellular response to organonitrogen compound IEP HCCA
BP GO:0072334 UDP-galactose transmembrane transport IEP HCCA
BP GO:0080148 negative regulation of response to water deprivation IEP HCCA
BP GO:0080163 regulation of protein serine/threonine phosphatase activity IEP HCCA
BP GO:0080170 hydrogen peroxide transmembrane transport IEP HCCA
BP GO:0090480 purine nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098552 side of membrane IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901652 response to peptide IEP HCCA
BP GO:2000070 regulation of response to water deprivation IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 5 44
IPR013187 F-box-assoc_dom_typ3 197 328
PLAZA 3.0 Dicots AT3G57590