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Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, synergid; EXPRESSED DURING: C globular stage; BEST Arabidopsis thaliana protein match is: Plant self-incompatibility protein S1 family (TAIR:AT3G57840.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG_01_0000210 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000210_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G57850 | |
| Cluster | HCCA: Cluster_178 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G04645 | No alias | Plant self-incompatibility protein S1 family | 0.08 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G26796 | No alias | Plant self-incompatibility protein S1 family | 0.09 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G26797 | No alias | Plant self-incompatibility protein S1 family | 0.08 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G26798 | No alias | Plant self-incompatibility protein S1 family | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G26799 | No alias | Plant self-incompatibility protein S1 family | 0.08 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G16960 | No alias | FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... | 0.1 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G55672 | No alias | Plant self-incompatibility protein S1 family | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G55677 | No alias | Plant self-incompatibility protein S1 family | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT4G16195 | No alias | Plant self-incompatibility protein S1 family | 0.11 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT4G24973 | No alias | Plant self-incompatibility protein S1 family | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G12060 | No alias | Plant self-incompatibility protein S1 family | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| CC | GO:0009507 | chloroplast | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| BP | GO:0006935 | chemotaxis | IEP | HCCA |
| BP | GO:0010183 | pollen tube guidance | IEP | HCCA |
| BP | GO:0040011 | locomotion | IEP | HCCA |
| BP | GO:0042330 | taxis | IEP | HCCA |
| MF | GO:0045547 | dehydrodolichyl diphosphate synthase activity | IEP | HCCA |
| BP | GO:0050918 | positive chemotaxis | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT3G57850 |