- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 1519 Blast hits to 1241 proteins in 182 species: Archae - 0; Bacteria - 60; Metazoa - 576; Fungi - 133; Plants - 127; Viruses - 30; Other Eukaryotes - 593 (source: NCBI BLink).
Gene families : OG_01_0012158 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G57930 | |
| Cluster | HCCA: Cluster_72 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001091 | RNA polymerase II general transcription initiation factor binding | IEP | HCCA |
| MF | GO:0001093 | TFIIB-class transcription factor binding | IEP | HCCA |
| MF | GO:0001098 | basal transcription machinery binding | IEP | HCCA |
| MF | GO:0001099 | basal RNA polymerase II transcription machinery binding | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003724 | RNA helicase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0008134 | transcription factor binding | IEP | HCCA |
| MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | HCCA |
| BP | GO:0008643 | carbohydrate transport | IEP | HCCA |
| BP | GO:0009615 | response to virus | IEP | HCCA |
| BP | GO:0009616 | RNAi-mediated antiviral immune response | IEP | HCCA |
| BP | GO:0016441 | posttranscriptional gene silencing | IEP | HCCA |
| BP | GO:0051607 | defense response to virus | IEP | HCCA |
| BP | GO:0055062 | phosphate ion homeostasis | IEP | HCCA |
| BP | GO:0055081 | anion homeostasis | IEP | HCCA |
| MF | GO:0070063 | RNA polymerase binding | IEP | HCCA |
| BP | GO:0072506 | trivalent inorganic anion homeostasis | IEP | HCCA |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | HCCA |
| BP | GO:0140546 | defense response to symbiont | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT3G57930 |